Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_F01
(1080 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 38 0.016
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 34 0.20
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 32 0.81
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 30 2.5
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 30 2.5
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 29 4.3
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 29 4.3
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 29 4.3
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen prot... 29 5.7
AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein... 29 5.7
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 7.6
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 7.6
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 29 7.6
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 29 7.6
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 37.5 bits (83), Expect = 0.016
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +2
Query: 869 EGPXXXEEXGXXPGPXXEXXADGXHXPPXPDKGAQXGSPRRARAGEGTGRDPXXEXGRXG 1048
+GP G PGP +G + P P + G P G+ R P E G+ G
Sbjct: 178 KGPAGPPGPGGKPGPAGPPGENGNNGEPQPGAPGEPGQP-----GQPGQRGPAGEPGKDG 232
Query: 1049 XPGGAAAXG 1075
PGG G
Sbjct: 233 SPGGQGEKG 241
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical protein
C53B4.5 protein.
Length = 289
Score = 33.9 bits (74), Expect = 0.20
Identities = 19/69 (27%), Positives = 26/69 (37%)
Frame = +2
Query: 869 EGPXXXEEXGXXPGPXXEXXADGXHXPPXPDKGAQXGSPRRARAGEGTGRDPXXEXGRXG 1048
+GP G PGP +G + P P + G P G+ R P + G+ G
Sbjct: 176 KGPAGPPGPGGKPGPAGPPGENGRNGEPQPGSPGEPGRP-----GQPGSRGPAGQPGKDG 230
Query: 1049 XPGGAAAXG 1075
GG G
Sbjct: 231 AQGGPGEKG 239
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 31.9 bits (69), Expect = 0.81
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +1
Query: 664 PKPXTKPRQQXXXXGXQSAXEXGXPGXKXPXGXHPTNXHPXXGGAXGATG 813
P P +P Q ++ G PG P G + HP GA GA G
Sbjct: 206 PGPAGQPGQPGEPGHSDTSSTAGPPGPPGPGGPPGQDGHPGDAGAPGAPG 255
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 30.3 bits (65), Expect = 2.5
Identities = 20/57 (35%), Positives = 22/57 (38%)
Frame = +2
Query: 905 PGPXXEXXADGXHXPPXPDKGAQXGSPRRARAGEGTGRDPXXEXGRXGXPGGAAAXG 1075
PG A G PP P G+P A A E P + G G PG A A G
Sbjct: 231 PGTPGPAGAAGPPGPPGP-----AGNPGSAGASEPGPAGPAGDAGPDGAPGNAGAPG 282
Score = 29.5 bits (63), Expect = 4.3
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +2
Query: 905 PGPXXEXXADGXHXPPXPD--KGAQXGSPRRARAGEGTGRDPXXEXGRXGXPGGAAAXG 1075
PGP G PP P+ G +P R GE P G G PG A G
Sbjct: 164 PGPAGPPGGPGPPGPPGPEGAPGEDGNTPSRGGVGEA---GPPGPPGTSGNPGTDGAPG 219
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 30.3 bits (65), Expect = 2.5
Identities = 20/57 (35%), Positives = 22/57 (38%)
Frame = +2
Query: 905 PGPXXEXXADGXHXPPXPDKGAQXGSPRRARAGEGTGRDPXXEXGRXGXPGGAAAXG 1075
PG A G PP P G+P A A E P + G G PG A A G
Sbjct: 241 PGTPGPAGAAGPPGPPGP-----AGNPGSAGASEPGPAGPAGDAGPDGAPGNAGAPG 292
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/55 (27%), Positives = 21/55 (38%)
Frame = +1
Query: 670 PXTKPRQQXXXXGXQSAXEXGXPGXKXPXGXHPTNXHPXXGGAXGATGXXAXHGN 834
P + +Q+ S G PG P G + HP GG+ G G G+
Sbjct: 124 PKSHEQQECIKCPAGSPGPAGAPGAPGPQGPNGQPGHPGQGGSQGPAGPRGPAGD 178
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 29.5 bits (63), Expect = 4.3
Identities = 20/68 (29%), Positives = 23/68 (33%)
Frame = +2
Query: 872 GPXXXEEXGXXPGPXXEXXADGXHXPPXPDKGAQXGSPRRARAGEGTGRDPXXEXGRXGX 1051
GP + G A G PP P +G R +AG P G G
Sbjct: 168 GPTGGQGGPGEQGDAGRPGAAGRPGPPGP-RGEPGTEYRPGQAGRAGPPGPRGPPGPEGN 226
Query: 1052 PGGAAAXG 1075
PGGA G
Sbjct: 227 PGGAGEDG 234
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 29.5 bits (63), Expect = 4.3
Identities = 20/68 (29%), Positives = 23/68 (33%)
Frame = +2
Query: 872 GPXXXEEXGXXPGPXXEXXADGXHXPPXPDKGAQXGSPRRARAGEGTGRDPXXEXGRXGX 1051
GP + G A G PP P +G R +AG P G G
Sbjct: 168 GPTGGQGGPGEQGDAGRPGAAGCPGPPGP-RGEPGTEYRPGQAGRAGPPGPRGPPGPEGN 226
Query: 1052 PGGAAAXG 1075
PGGA G
Sbjct: 227 PGGAGEDG 234
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 29.1 bits (62), Expect = 5.7
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = +1
Query: 730 GXPGXKXPXGXHPTNXHPXXGGAXGATGXXAXHGNKXTXPXXTKNXGG 873
G PG + P G HP G G G G + P GG
Sbjct: 242 GAPGPQGPPGPPGQQGHPGQAGPAGQPGQPGPQGERGICPKYCALDGG 289
>Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical protein
AC3.6 protein.
Length = 325
Score = 29.1 bits (62), Expect = 5.7
Identities = 17/59 (28%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Frame = +2
Query: 905 PGPXXEXXADGXHXPPXPDKGAQXGSPRRARAGEGTGRDPXXE--XGRXGXPGGAAAXG 1075
PGP G PP PD G + +G P G G PGG+ G
Sbjct: 220 PGPAGSPGRVGRGGPPGPDGGYPMSGEPGSSGPQGKAGQPGGPGVDGHPGRPGGSGRPG 278
>AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen protein
104 protein.
Length = 281
Score = 29.1 bits (62), Expect = 5.7
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +1
Query: 730 GXPGXKXPXGX--HPTNXHPXXGGAXGATGXXAXHGNK-XTXPXXTKNXGGP 876
G PG + P G HP N P GG GA G G+K TK GP
Sbjct: 160 GAPGLRGPDGHPGHPGN--PGYGGEPGAPGNNGEPGDKGRDGSHGTKGAPGP 209
>AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein 2
protein.
Length = 298
Score = 29.1 bits (62), Expect = 5.7
Identities = 19/63 (30%), Positives = 24/63 (38%)
Frame = +2
Query: 872 GPXXXEEXGXXPGPXXEXXADGXHXPPXPDKGAQXGSPRRARAGEGTGRDPXXEXGRXGX 1051
GP + PGP E DG + +G Q + R GE + P G G
Sbjct: 225 GPAGHKGVRGPPGPRGEAGLDGGNSEGP--QGPQGDAGRPGPVGEQGPQGPEGPQGPPGE 282
Query: 1052 PGG 1060
PGG
Sbjct: 283 PGG 285
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical protein
B0035.1b protein.
Length = 341
Score = 28.7 bits (61), Expect = 7.6
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -1
Query: 1080 PXPXAAAPPGXPXLPXSXXGSRPVPSPALARRGLPXCAP 964
P P P P P G P+PS + RG+P P
Sbjct: 122 PFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYP 160
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical protein
B0035.1a protein.
Length = 298
Score = 28.7 bits (61), Expect = 7.6
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -1
Query: 1080 PXPXAAAPPGXPXLPXSXXGSRPVPSPALARRGLPXCAP 964
P P P P P G P+PS + RG+P P
Sbjct: 122 PFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYP 160
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/54 (29%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +1
Query: 730 GXPGXKXPXGXHPTNXHPXXGGAXGATGXXAXHG-NKXTXPXXTKNXGGPXXRR 888
G PG + P G N HP G G G G + P GP R
Sbjct: 158 GEPGVRGPNGPPGPNGHPGQPGRPGPAGPAGPEGKDGPVGPHGPAGPAGPRGTR 211
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical protein
F17C8.2 protein.
Length = 296
Score = 28.7 bits (61), Expect = 7.6
Identities = 21/69 (30%), Positives = 24/69 (34%)
Frame = +2
Query: 869 EGPXXXEEXGXXPGPXXEXXADGXHXPPXPDKGAQXGSPRRARAGEGTGRDPXXEXGRXG 1048
EGP PG + DG PP PD G + GE E G+ G
Sbjct: 158 EGPAGPAGSDGQPGAPGDAGKDGPPGPPGPD-GDSGPNGEAGPNGEPGAPGKDGEKGK-G 215
Query: 1049 XPGGAAAXG 1075
PG A G
Sbjct: 216 EPGPAGPPG 224
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.305 0.125 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,098,646
Number of Sequences: 27780
Number of extensions: 157843
Number of successful extensions: 538
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2898039926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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