Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_E20
(904 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57846-1|AAB02265.1| 51|Homo sapiens ribosomal protein L39 pro... 57 8e-08
D79205-1|BAA11465.1| 51|Homo sapiens ribosomal protein L39 pro... 57 8e-08
BC070205-1|AAH70205.1| 51|Homo sapiens ribosomal protein L39 p... 57 8e-08
BC001019-1|AAH01019.1| 51|Homo sapiens ribosomal protein L39 p... 57 8e-08
AB061835-1|BAB79473.1| 51|Homo sapiens ribosomal protein L39 p... 57 8e-08
AB209077-1|BAD92314.1| 70|Homo sapiens ribosomal protein L39 v... 56 2e-07
L05096-1|AAC15859.1| 51|Homo sapiens ribosomal protein L39 pro... 51 5e-06
BC012328-1|AAH12328.1| 51|Homo sapiens ribosomal protein L39-l... 51 5e-06
AF548529-1|AAN52397.1| 51|Homo sapiens ribosomal protein L39-2... 51 5e-06
AB063610-1|BAC19837.1| 51|Homo sapiens ribosomal protein L39-l... 51 5e-06
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 31 5.7
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 31 5.7
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 31 5.7
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 31 5.7
>U57846-1|AAB02265.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 57.2 bits (132), Expect = 8e-08
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 147 ETQTXPXPQWVRMXTGNTXXYNAKRRHWRRTKL 245
+ Q P PQW+RM TGN YN+KRRHWRRTKL
Sbjct: 17 QKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKL 49
>D79205-1|BAA11465.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 57.2 bits (132), Expect = 8e-08
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 147 ETQTXPXPQWVRMXTGNTXXYNAKRRHWRRTKL 245
+ Q P PQW+RM TGN YN+KRRHWRRTKL
Sbjct: 17 QKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKL 49
>BC070205-1|AAH70205.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 57.2 bits (132), Expect = 8e-08
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 147 ETQTXPXPQWVRMXTGNTXXYNAKRRHWRRTKL 245
+ Q P PQW+RM TGN YN+KRRHWRRTKL
Sbjct: 17 QKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKL 49
>BC001019-1|AAH01019.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 57.2 bits (132), Expect = 8e-08
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 147 ETQTXPXPQWVRMXTGNTXXYNAKRRHWRRTKL 245
+ Q P PQW+RM TGN YN+KRRHWRRTKL
Sbjct: 17 QKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKL 49
>AB061835-1|BAB79473.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 57.2 bits (132), Expect = 8e-08
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 147 ETQTXPXPQWVRMXTGNTXXYNAKRRHWRRTKL 245
+ Q P PQW+RM TGN YN+KRRHWRRTKL
Sbjct: 17 QKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKL 49
>AB209077-1|BAD92314.1| 70|Homo sapiens ribosomal protein L39
variant protein.
Length = 70
Score = 56.0 bits (129), Expect = 2e-07
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +3
Query: 147 ETQTXPXPQWVRMXTGNTXXYNAKRRHWRRTKL 245
+ Q P PQW+RM TGN YN+KRRHW+RTKL
Sbjct: 36 QKQNRPIPQWIRMKTGNKIRYNSKRRHWKRTKL 68
>L05096-1|AAC15859.1| 51|Homo sapiens ribosomal protein L39
protein.
Length = 51
Score = 51.2 bits (117), Expect = 5e-06
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 147 ETQTXPXPQWVRMXTGNTXXYNAKRRHWRRTKL 245
+ Q P PQW++M G+ YN+KRRHWRRTKL
Sbjct: 17 QKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKL 49
>BC012328-1|AAH12328.1| 51|Homo sapiens ribosomal protein L39-like
protein.
Length = 51
Score = 51.2 bits (117), Expect = 5e-06
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 147 ETQTXPXPQWVRMXTGNTXXYNAKRRHWRRTKL 245
+ Q P PQW++M G+ YN+KRRHWRRTKL
Sbjct: 17 QKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKL 49
>AF548529-1|AAN52397.1| 51|Homo sapiens ribosomal protein L39-2
protein.
Length = 51
Score = 51.2 bits (117), Expect = 5e-06
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 147 ETQTXPXPQWVRMXTGNTXXYNAKRRHWRRTKL 245
+ Q P PQW++M G+ YN+KRRHWRRTKL
Sbjct: 17 QKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKL 49
>AB063610-1|BAC19837.1| 51|Homo sapiens ribosomal protein L39-like
protein.
Length = 51
Score = 51.2 bits (117), Expect = 5e-06
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 147 ETQTXPXPQWVRMXTGNTXXYNAKRRHWRRTKL 245
+ Q P PQW++M G+ YN+KRRHWRRTKL
Sbjct: 17 QKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKL 49
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 823 PXCLXVXPIXXPPPLXEPXPKXPPP 897
P L V P+ PPP P P PPP
Sbjct: 363 PSVLGVGPVAPPPPPPPPPPPGPPP 387
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 823 PXCLXVXPIXXPPPLXEPXPKXPPP 897
P L V P+ PPP P P PPP
Sbjct: 363 PSVLGVGPVAPPPPPPPPPPPGPPP 387
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 823 PXCLXVXPIXXPPPLXEPXPKXPPP 897
P L V P+ PPP P P PPP
Sbjct: 363 PSVLGVGPVAPPPPPPPPPPPGPPP 387
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 823 PXCLXVXPIXXPPPLXEPXPKXPPP 897
P L V P+ PPP P P PPP
Sbjct: 363 PSVLGVGPVAPPPPPPPPPPPGPPP 387
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,853,845
Number of Sequences: 237096
Number of extensions: 1368597
Number of successful extensions: 5267
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4754
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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