Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_E19
         (837 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_1122 + 30546314-30549277,30549615-30549693,30549857-305499...    30   2.6  
04_04_0735 - 27667780-27667887,27668116-27668211,27668346-276684...    29   3.5  
08_01_0238 - 1988688-1988830,1988989-1989257,1989339-1989600,198...    29   4.6  
10_08_0328 - 16805296-16806121,16806493-16807274                       29   6.1  

>03_05_1122 + 30546314-30549277,30549615-30549693,30549857-30549945,
            30550422-30550538,30550873-30551111,30552279-30552365,
            30552732-30552831,30553319-30553532,30553617-30553777
          Length = 1349

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
 Frame = -1

Query: 531  RSYLTVR--IDKRFFVRIESREVEAVDGTMEHLPDAVTCHTQILCRFRCVIKCIYPILST 358
            R+ L V+  ++  F  RI  R  E V  T+  L + V C+++I      + +C  PI+  
Sbjct: 1089 RNLLAVKKDLEPEFSCRIIQRIHENVPETVVALDERVECNSKIAVALSLMDECFLPIVDQ 1148

Query: 357  EVH-NVFASII--C-SSYTRIDARNF 292
                N+  +++  C S++ R+D   F
Sbjct: 1149 RTGINLIRNVVYNCGSNFVRMDFHGF 1174


>04_04_0735 -
           27667780-27667887,27668116-27668211,27668346-27668455,
           27668545-27668648,27669279-27669556
          Length = 231

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
 Frame = -1

Query: 570 SNQSCFDVGEFRYRSYLTVRIDKRFFVRIESREVEAVDGTMEHL----PD---AVTCHTQ 412
           S  +   + E   + Y  +R D RF VR++  +++ V   +EHL    PD    V     
Sbjct: 145 STGNALALSELNLKFYTPLRKDDRFVVRMKVVKIKGVRIIVEHLIETLPDRKLVVDAKAT 204

Query: 411 ILC---RFRCVIKCIYPILSTEVHNVFAS 334
            +C   ++R     ++P LST++H  F S
Sbjct: 205 AVCLDNKYRPTR--VFPELSTKLHQFFLS 231


>08_01_0238 -
           1988688-1988830,1988989-1989257,1989339-1989600,
           1989693-1989805,1990560-1990594,1990771-1990878,
           1992178-1992483
          Length = 411

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -1

Query: 375 YPILSTEVHNVFASIICSSYTRI 307
           YP+  T +H VF+S++C + T+I
Sbjct: 114 YPVALTLLHMVFSSVVCFAITKI 136


>10_08_0328 - 16805296-16806121,16806493-16807274
          Length = 535

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 292 EISGINSGIATAYDRSKHVVYLGGQDGIYTFDYTTKSAKNL 414
           + SG  S + T+Y+ S H VYL G      F  T +  K L
Sbjct: 407 DFSGEISALGTSYNCSLHSVYLAGNGFTGVFPSTLEGCKTL 447


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,635,007
Number of Sequences: 37544
Number of extensions: 349122
Number of successful extensions: 781
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)