Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_E15
(875 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 32 0.093
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.28
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 28 2.0
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 27 2.7
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 27 3.5
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 27 4.6
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 27 4.6
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 4.6
SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1 |Schizosac... 26 6.1
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 26 8.1
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 32.3 bits (70), Expect = 0.093
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = +2
Query: 467 VNSEGSWVYEKDVLKITFPLKQ-KQPEDSKRPVAEPTETTSTNVSREEMEFTTESNV--R 637
VNS G+ E + F ++ ++ E+ K + P + S+EE E R
Sbjct: 323 VNSPGALSVEATYINQNFCVQALRETEEEKYKLPHPNPFYN---SKEESEPLAAHGYIYR 379
Query: 638 DVDVGLETAQKTNEIAKAVEATTYAVNIRDDAEFLPI 748
DVD+ LET +K ++ E Y N +D +++ I
Sbjct: 380 DVDLSLETDEKPVKLMVRTEVDGYVKNPANDVQYISI 416
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 30.7 bits (66), Expect = 0.28
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -3
Query: 735 SASSLMLTAYVVASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVEVVSVGSATG 556
S+SS TA +S++ IS + S PTSTS T+ S +S SS + +S S++
Sbjct: 255 SSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSS 314
Query: 555 LLLSS 541
SS
Sbjct: 315 SSFSS 319
Score = 25.8 bits (54), Expect = 8.1
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = -3
Query: 696 STAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVEVVSVGSATGL----LLSSGCFC 529
ST+ IS + S PTSTS T+ S +S SS + + S+ S++ SS
Sbjct: 285 STSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTIS 344
Query: 528 FSGKVIFNTSFS*TQLPSEFTS 463
S ++SFS T S+ +S
Sbjct: 345 SSSSSPSSSSFSSTTSSSKSSS 366
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = -3
Query: 720 MLTAYVVASTAFAI--SLVFWAVSKPTSTSRTLLSVVNSISSRLTFVEVVSVGSATGLLL 547
++ + V A+ +F + + V+WA+ T L++++S+ T +SV +A GLLL
Sbjct: 70 IILSIVSAALSFYLDTNAVWWAIRTITHLEIVGLNILSSLKYGSTLFSWISVANAFGLLL 129
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/61 (21%), Positives = 28/61 (45%)
Frame = +2
Query: 554 RPVAEPTETTSTNVSREEMEFTTESNVRDVDVGLETAQKTNEIAKAVEATTYAVNIRDDA 733
R + ++ V E+ E T + DV++ + + + N +A+ + T+ + DD
Sbjct: 118 RQTIDRKKSLERRVREEQEEKTDNEDDNDVEISTQESLENNGLAEKKDDTSSLATLEDDI 177
Query: 734 E 736
E
Sbjct: 178 E 178
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 27.1 bits (57), Expect = 3.5
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +2
Query: 203 ESMLDTHSLWSNLANEMQHLDNMMKELSLKFPSIINEGRVEGDKYQISIHLPGYEQKDIN 382
E + + +W+++ +MQ D ++L F I N G++ Q +I L G + ++
Sbjct: 104 EGSTNVNEVWNDITEDMQSQDFSTEDLKQLFLLIFNNGKLR-TLLQNAIVLLGQQTTNVA 162
Query: 383 VKAKN 397
K N
Sbjct: 163 SKKLN 167
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 115 AAVSAAPQYYHGSSHWPYHHYDPXQSL 195
A +A PQYY +P HY P Q L
Sbjct: 502 ATDAAKPQYYIPKDPYPVPHYYPQQPL 528
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +2
Query: 524 LKQKQPEDSKRPVAEPTETTSTNVSREEMEFTTESNVRDVD 646
+K ++PE + +PV + ST + +E E T +++V +
Sbjct: 908 IKPQKPEPALKPVEGTADPKSTKRNHQETEKTADTDVSSTE 948
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 26.6 bits (56), Expect = 4.6
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Frame = -3
Query: 753 YGIGKNSASSLMLTAYVVASTAFAISLVFWAVSKPTSTS---RTLL---SVVNSISSRLT 592
Y + ++S +S++ AY+ S + S V ++ PTS+S +LL S+ S SS
Sbjct: 387 YSVVQSSLASIISNAYIATSKSGLNSGVSTLLASPTSSSTFVTSLLRRSSIDGSASSSSA 446
Query: 591 FVEVVSVGSAT 559
+ V +V S+T
Sbjct: 447 SLAVPTVSSST 457
>SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 735 SASSLMLTAYVVASTAFAISLVFWAVSKPTSTS 637
S S+ + +A+T+F SLV A + P+STS
Sbjct: 463 SVSATPTVSMSIAATSFGSSLVLTASASPSSTS 495
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 248 EMQHLDNMMKELSLKFPSIINEGRV 322
E+++L NM+ EL KFP + GR+
Sbjct: 1509 EVEYLVNMVDELLNKFPDVNFTGRI 1533
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,248,276
Number of Sequences: 5004
Number of extensions: 66068
Number of successful extensions: 211
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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