BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_E14
(840 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0490 + 22672241-22674679 27 0.38
03_05_1100 - 30404224-30405018,30405100-30405435 31 1.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 1.4
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 27 3.1
03_06_0264 + 32738224-32738553,32739298-32739768,32739864-327400... 24 3.2
02_05_0686 - 30900748-30902167,30903442-30904742 24 4.0
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 27 4.1
07_03_1382 - 26170563-26170631,26171151-26171843 24 4.4
03_01_0515 - 3864796-3865425 24 4.5
05_01_0131 + 888247-888771,889092-889154 24 4.5
07_01_0080 + 587674-588510 29 4.6
06_03_1191 + 28286685-28287008,28287149-28287211,28287377-282874... 29 4.6
04_03_0212 + 12697854-12698549,12698655-12698930,12698991-126990... 29 4.6
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 29 4.6
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 24 4.9
07_01_0862 - 7172083-7172931 29 6.1
07_01_0753 - 5799733-5799741,5799938-5800642 29 6.1
02_05_0789 + 31766300-31767056,31767316-31767659 29 6.1
04_01_0080 - 889548-889892 28 8.1
10_08_0935 + 21670372-21671396,21672057-21672987 25 8.8
>01_05_0490 + 22672241-22674679
Length = 812
Score = 26.6 bits (56), Expect(2) = 0.38
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 773 PPPPPPPP 750
PPPPPPPP
Sbjct: 608 PPPPPPPP 615
Score = 24.6 bits (51), Expect(2) = 0.38
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 770 PPPPPPPXXXXXKK 729
PPPPPPP +K
Sbjct: 641 PPPPPPPTTRRSRK 654
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 773 PPPPPPP 753
PPPPPPP
Sbjct: 641 PPPPPPP 647
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 770 PPPPPPP 750
PPPPPPP
Sbjct: 664 PPPPPPP 670
>03_05_1100 - 30404224-30405018,30405100-30405435
Length = 376
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 337 LPVFVFRTXXGPGXARSTVVRRMGPRGQRNRGLRDSHSPAR 215
+ VF+ R PG + V R+ G G RNR L D+ S R
Sbjct: 227 MTVFLARAMKNPGFLQMLVDRQAGQHGARNRVLEDALSKKR 267
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 830 PPPXXGGXXFFFXXXXXXXPPPPPPPP 750
PPP G F PPPPPP P
Sbjct: 550 PPPPPSGNKPAFSPPPPPPPPPPPPLP 576
Score = 26.6 bits (56), Expect(2) = 1.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 773 PPPPPPPP 750
PPPPPPPP
Sbjct: 712 PPPPPPPP 719
Score = 22.6 bits (46), Expect(2) = 1.4
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 770 PPPPPPPXXXXXKK 729
PP PPPP KK
Sbjct: 747 PPAPPPPPLMTGKK 760
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 26.6 bits (56), Expect(2) = 3.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 773 PPPPPPPP 750
PPPPPPPP
Sbjct: 311 PPPPPPPP 318
Score = 21.4 bits (43), Expect(2) = 3.1
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 770 PPPPPPPXXXXXKK 729
PP PPPP K+
Sbjct: 339 PPAPPPPPPPAAKR 352
>03_06_0264 +
32738224-32738553,32739298-32739768,32739864-32740007,
32740570-32740671,32741758-32741873,32741959-32742028,
32742308-32742376,32742898-32742948,32743038-32743196
Length = 503
Score = 24.2 bits (50), Expect(2) = 3.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 751 GGGGGGGGXXXXXXKKK 801
GGGGGGGG +K+
Sbjct: 82 GGGGGGGGTGGEDGEKR 98
Score = 23.8 bits (49), Expect(2) = 3.2
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 733 FXXXXXGGGGGGGG 774
F GGGGGGGG
Sbjct: 74 FSIDGGGGGGGGGG 87
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 773 PPPPPPP 753
PPPPPPP
Sbjct: 313 PPPPPPP 319
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 773 PPPPPPP 753
PPPPPPP
Sbjct: 353 PPPPPPP 359
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 770 PPPPPPP 750
PPPPPPP
Sbjct: 353 PPPPPPP 359
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 770 PPPPPPP 750
PPPPPPP
Sbjct: 364 PPPPPPP 370
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 26.6 bits (56), Expect(2) = 5.3
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 773 PPPPPPPP 750
PPPPPPPP
Sbjct: 121 PPPPPPPP 128
Score = 23.8 bits (49), Expect(2) = 4.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 773 PPPPPPP 753
PPPPPPP
Sbjct: 54 PPPPPPP 60
Score = 23.8 bits (49), Expect(2) = 4.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 770 PPPPPPP 750
PPPPPPP
Sbjct: 92 PPPPPPP 98
Score = 20.6 bits (41), Expect(2) = 5.3
Identities = 9/25 (36%), Positives = 9/25 (36%)
Frame = -2
Query: 827 PPXXGGXXFFFXXXXXXXPPPPPPP 753
PP F F PPPPP
Sbjct: 62 PPPPHQPQFNFGPGPPQQQQPPPPP 86
>07_03_1382 - 26170563-26170631,26171151-26171843
Length = 253
Score = 23.8 bits (49), Expect(2) = 4.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 773 PPPPPPP 753
PPPPPPP
Sbjct: 184 PPPPPPP 190
Score = 23.8 bits (49), Expect(2) = 4.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 770 PPPPPPP 750
PPPPPPP
Sbjct: 200 PPPPPPP 206
>03_01_0515 - 3864796-3865425
Length = 209
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 773 PPPPPPP 753
PPPPPPP
Sbjct: 71 PPPPPPP 77
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 770 PPPPPPP 750
PPPPPPP
Sbjct: 89 PPPPPPP 95
>05_01_0131 + 888247-888771,889092-889154
Length = 195
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 773 PPPPPPP 753
PPPPPPP
Sbjct: 133 PPPPPPP 139
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 770 PPPPPPP 750
PPPPPPP
Sbjct: 160 PPPPPPP 166
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 827 PPXXGGXXFFFXXXXXXXPPPPPPPP 750
PP GG F PPPPPPPP
Sbjct: 79 PPRLGGDGMF-----RRPPPPPPPPP 99
>06_03_1191 +
28286685-28287008,28287149-28287211,28287377-28287461,
28287561-28287623,28287954-28288029,28288190-28288223,
28289553-28289659,28289738-28289807,28289852-28289950
Length = 306
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 830 PPPXXGGXXFFFXXXXXXXPPPPPPPP 750
PPP G + PP PPPPP
Sbjct: 22 PPPPPPGTSLYASYRHHAYPPHPPPPP 48
>04_03_0212 +
12697854-12698549,12698655-12698930,12698991-12699038,
12699659-12699715,12700965-12701163,12702267-12702373,
12702586-12702759,12702844-12703083,12703638-12703693,
12704499-12704622
Length = 658
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 751 GGGGGGGGXXXXXXKKKKXXPPXXGGG 831
GGGGGGGG ++ PP G G
Sbjct: 56 GGGGGGGGGGGGWWRQGGSGPPDPGDG 82
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 827 PPXXGGXXFFFXXXXXXXPPPPPPPP 750
PP G F PPPPPPPP
Sbjct: 516 PPGFQGLAGPFYGPPYPAPPPPPPPP 541
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 24.2 bits (50), Expect(3) = 4.9
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -2
Query: 830 PPPXXGGXXFFFXXXXXXXPPPPPP 756
PPP + PPPPPP
Sbjct: 111 PPPPPPPHLLHYYGHPPPPPPPPPP 135
Score = 20.6 bits (41), Expect(3) = 4.9
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -2
Query: 773 PPPPPPP 753
P PPPPP
Sbjct: 168 PSPPPPP 174
Score = 20.6 bits (41), Expect(3) = 4.9
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -2
Query: 770 PPPPPPP 750
PPPPP P
Sbjct: 170 PPPPPAP 176
>07_01_0862 - 7172083-7172931
Length = 282
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 773 PPPPPPPPXXXXXKK 729
PPPPPPPP KK
Sbjct: 128 PPPPPPPPPTAEEKK 142
>07_01_0753 - 5799733-5799741,5799938-5800642
Length = 237
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 830 PPPXXGGXXFFFXXXXXXXPPPPPPPP 750
PPP F PPPPPPPP
Sbjct: 27 PPPNQPYYAFPAAAYAPPPPPPPPPPP 53
>02_05_0789 + 31766300-31767056,31767316-31767659
Length = 366
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 800 FFXXXXXXXPPPPPPPP 750
FF PPPPPPPP
Sbjct: 61 FFMFLSVLSPPPPPPPP 77
>04_01_0080 - 889548-889892
Length = 114
Score = 28.3 bits (60), Expect = 8.1
Identities = 6/20 (30%), Positives = 16/20 (80%)
Frame = -1
Query: 381 IDLHNFINIQIPVHICQFSC 322
+D+H+++N+ + + +C+F C
Sbjct: 84 VDIHDYLNLALHMQLCRFGC 103
>10_08_0935 + 21670372-21671396,21672057-21672987
Length = 651
Score = 25.0 bits (52), Expect(2) = 8.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 751 GGGGGGGGXXXXXXKK 798
GGGGGGGG KK
Sbjct: 54 GGGGGGGGEGKSSEKK 69
Score = 21.4 bits (43), Expect(2) = 8.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 733 FXXXXXGGGGGGG 771
F GGGGGGG
Sbjct: 49 FHMDVGGGGGGGG 61
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,433,567
Number of Sequences: 37544
Number of extensions: 357088
Number of successful extensions: 13018
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8814
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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