Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_E14
(840 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 27 0.75
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 31 0.77
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 26 0.79
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 27 0.92
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 1.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 1.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 24 3.5
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.4
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 5.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 7.2
Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z70212-9|CAA94168.1| 491|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z50742-6|CAA90619.1| 491|Caenorhabditis elegans Hypothetical pr... 28 9.5
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 28 9.5
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 26.6 bits (56), Expect(2) = 0.75
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -2
Query: 824 PXXGGXXFFFXXXXXXXPPPPPPP 753
P GG PPPPPPP
Sbjct: 733 PMIGGPPLMHPTFSTSAPPPPPPP 756
Score = 23.4 bits (48), Expect(2) = 0.75
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 773 PPPPPPPP 750
PPPPPP P
Sbjct: 751 PPPPPPQP 758
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 815 GGXXFFFXXXXXXXPPPPPPPP 750
GG FF PPPPPPPP
Sbjct: 218 GGNNGFFVPVPVVIPPPPPPPP 239
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 26.2 bits (55), Expect(2) = 0.79
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 751 GGGGGGGGXXXXXXKKKKXXPPXXGGG 831
GGGG GGG PP GGG
Sbjct: 38 GGGGCGGGGGCGGGCAPPPPPPACGGG 64
Score = 23.8 bits (49), Expect(2) = 0.79
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 733 FXXXXXGGGGGGGG 774
F GGGGGGGG
Sbjct: 18 FLFPSGGGGGGGGG 31
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 26.6 bits (56), Expect(2) = 0.92
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 773 PPPPPPPP 750
PPPPPPPP
Sbjct: 1356 PPPPPPPP 1363
Score = 23.0 bits (47), Expect(2) = 0.92
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 767 PPPPPPXXXXXKK 729
PPPPPP KK
Sbjct: 1390 PPPPPPLPSEEKK 1402
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 830 PPPXXGGXXFFFXXXXXXXPPPPPPPP 750
PPP F PPPPPPPP
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPPPPP 637
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 830 PPPXXGGXXFFFXXXXXXXPPPPPPPP 750
PPP PPPPPPPP
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPP 656
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 830 PPPXXGGXXFFFXXXXXXXPPPPPPPP 750
PPP F PPPPPPPP
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPPPPP 463
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 830 PPPXXGGXXFFFXXXXXXXPPPPPPPP 750
PPP PPPPPPPP
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPP 482
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 23.8 bits (49), Expect(2) = 3.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 773 PPPPPPP 753
PPPPPPP
Sbjct: 122 PPPPPPP 128
Score = 23.8 bits (49), Expect(2) = 3.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 770 PPPPPPP 750
PPPPPPP
Sbjct: 138 PPPPPPP 144
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 830 PPPXXGGXXFFFXXXXXXXPPPPPPPP 750
PPP F PPPPPPPP
Sbjct: 46 PPPPICPPQFCPPPPMCPPPPPPPPPP 72
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 830 PPPXXGGXXFFFXXXXXXXPPPPPPPP 750
PPP GG PPPPPPPP
Sbjct: 744 PPPPPGGLP-----PISGGPPPPPPPP 765
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 827 PPXXGGXXFFFXXXXXXXPPPPPPPP 750
PP GG PPPPPPPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 830 PPPXXGGXXFFFXXXXXXXPPPPPPPP 750
PPP GG PPPPPPPP
Sbjct: 744 PPPPPGGLP-----PISGGPPPPPPPP 765
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 827 PPXXGGXXFFFXXXXXXXPPPPPPPP 750
PP GG PPPPPPPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 830 PPPXXGGXXFFFXXXXXXXPPPPPPPP 750
PPP GG PPPPPPPP
Sbjct: 327 PPPPPGGLP-----PISGGPPPPPPPP 348
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 827 PPXXGGXXFFFXXXXXXXPPPPPPPP 750
PP GG PPPPPPPP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPP 360
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 751 GGGGGGGGXXXXXXKKKKXXPPXXGGG 831
GGGGG GG + PP GGG
Sbjct: 196 GGGGGSGGSGGGSGRFPPPPPPYGGGG 222
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 830 PPPXXGGXXFFFXXXXXXXPPPPPPPP 750
PPP PPPPPPPP
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPPP 93
>Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical
protein Y41E3.8 protein.
Length = 110
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 751 GGGGGGGGXXXXXXKKKKXXPPXXGGG 831
GGGGGGG PP GGG
Sbjct: 76 GGGGGGGRNIGGLPTSSGVAPPPMGGG 102
>Z70212-9|CAA94168.1| 491|Caenorhabditis elegans Hypothetical
protein R04D3.1 protein.
Length = 491
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 106 LYLLFVVAAVGYVTGQHFPTRKCPKG 183
L L F VA VGY+ + RK PKG
Sbjct: 5 LILAFFVATVGYLVHFYLKVRKYPKG 30
>Z50742-6|CAA90619.1| 491|Caenorhabditis elegans Hypothetical
protein R04D3.1 protein.
Length = 491
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 106 LYLLFVVAAVGYVTGQHFPTRKCPKG 183
L L F VA VGY+ + RK PKG
Sbjct: 5 LILAFFVATVGYLVHFYLKVRKYPKG 30
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 751 GGGGGGGGXXXXXXKKKKXXPPXXGGG 831
GGGGGGGG P GGG
Sbjct: 239 GGGGGGGGGQSNNNSSFSSVPAFNGGG 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,970,844
Number of Sequences: 27780
Number of extensions: 255377
Number of successful extensions: 2978
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2020
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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