Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_E12
(943 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 66 9e-12
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 38 0.003
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 36 0.011
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 35 0.019
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 33 0.058
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 33 0.058
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 30 0.41
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 30 0.54
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 29 0.95
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 28 2.2
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 27 5.1
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 27 5.1
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 26 6.7
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 8.8
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 65.7 bits (153), Expect = 9e-12
Identities = 31/67 (46%), Positives = 44/67 (65%)
Frame = +3
Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLY 338
DT+RRRMMM SG A + Y ++ C I EG +FFKGA +N+LRG GA VL +Y
Sbjct: 254 DTIRRRMMMTSGEA---VKYSSSFECGRQILAKEGARSFFKGAGANILRGVAGAGVLSIY 310
Query: 339 DEIKKVL 359
D+++ ++
Sbjct: 311 DQVQLLM 317
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 37.5 bits (83), Expect = 0.003
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVL 335
DTV+ RM QS A + YKN+IHC I +G F+ GA + R G V +
Sbjct: 225 DTVKSRM--QSLSASKE--YKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVFTV 280
Query: 336 YDEIKKVL 359
Y+++ ++L
Sbjct: 281 YEKVMEIL 288
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 35.5 bits (78), Expect = 0.011
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 156 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLV 332
FD ++ R+ A Y T+A+ EG +A +KG VLR G GG +LV
Sbjct: 220 FDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVPKVLRLGPGGGILLV 279
Query: 333 LYDEI 347
+++ +
Sbjct: 280 VFNSV 284
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 34.7 bits (76), Expect = 0.019
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 156 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 284
FD V+ R+ QS + +Y N + C I+K EG +AF+KG
Sbjct: 38 FDCVKVRLQSQSNVSP---IYNNALDCVKKISKNEGLAAFYKG 77
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 33.1 bits (72), Expect = 0.058
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 156 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFF 278
FD +++RM + S + YK+ +HC T+ + EG AF+
Sbjct: 134 FDVIKQRMQLPSRK------YKSALHCATTVFRNEGLGAFY 168
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 33.1 bits (72), Expect = 0.058
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +3
Query: 156 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 305
FDTV RM Q K+ LYKN I C ++EG A +KG +++ R
Sbjct: 250 FDTVMTRMYNQ----KNKELYKNPIDCILKTIRSEGFFALYKGFGAHLAR 295
Score = 29.5 bits (63), Expect = 0.72
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 216 YKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFV-LVLYDEIKKVL 359
YK+ + ++ I K G F GA + +LR G+ V L +Y+ K+++
Sbjct: 171 YKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSVQLPIYNWAKRMI 219
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 30.3 bits (65), Expect = 0.41
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVL 335
+ +R R+ Q G + Y I C+ K EG +KG N+L+ A ++
Sbjct: 357 NVIRTRLQTQ-GTSAHPATYDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVAISYLV 415
Query: 336 YDEIKKVL 359
Y+ KK L
Sbjct: 416 YENCKKWL 423
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 29.9 bits (64), Expect = 0.54
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 216 YKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 359
Y NT + I K EG +AF++G F ++ LY+ K L
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGIQFPLYEYFKSFL 277
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 29.1 bits (62), Expect = 0.95
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 216 YKNTIHCWATIAKTEGTSAFFKGAFSNVLR 305
YKN I KTEG + FF+G SN+L+
Sbjct: 266 YKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 246 IAKTEGTSAFFKGAFSNVLRGTG-GAFVLVLYDEIKKV 356
IAK EG FF G + +LR F L+ Y+++++V
Sbjct: 165 IAKQEGMKTFFYGYRATILRDIPFSGFQLLFYEKLRQV 202
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 26.6 bits (56), Expect = 5.1
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -2
Query: 225 CSCTGYRSWHDQTASSCAYGLC 160
CS + W D+ S C +G C
Sbjct: 627 CSVCNFERWKDRIISLCGHGFC 648
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 213 LYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 305
+YKN +H + EG F G F VLR
Sbjct: 244 IYKNFLHSAKLVYANEGFRGFLDGFFLRVLR 274
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 168 RRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEI 347
R ++ +SG+A Y+++I C + EG +KG +++L VLY++
Sbjct: 189 RLQLDKKSGQAAQ---YRSSIDCIIKTIRLEGFRGLYKGLSASLLGVGESTLQWVLYEKF 245
Query: 348 K 350
K
Sbjct: 246 K 246
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 334 KTSTKAPPVPLRTLEKAPL 278
K S+KAPPVPL + + P+
Sbjct: 1016 KLSSKAPPVPLPSADAPPI 1034
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,724,718
Number of Sequences: 5004
Number of extensions: 27668
Number of successful extensions: 85
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 479324640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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