Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_E12
(943 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 81 1e-15
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 61 1e-09
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 58 8e-09
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 58 1e-08
03_02_0646 + 10141967-10142476,10143721-10144254 39 0.005
03_05_1041 - 29884975-29885107,29885485-29885552,29885652-298858... 38 0.012
01_07_0386 + 43218686-43218745,43218972-43219190,43219307-432193... 36 0.035
04_04_0048 + 22351788-22352177,22353175-22353711 36 0.047
11_08_0097 + 28330565-28330645,28330768-28330986,28331066-283311... 35 0.11
12_02_0618 - 21262021-21262117,21262429-21262466,21262933-212629... 34 0.14
09_04_0437 - 17587944-17588909 32 0.58
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 32 0.76
08_02_1016 - 23606089-23607072 31 1.3
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 31 1.8
11_04_0086 + 13362788-13362937,13363887-13363970,13364233-133642... 30 3.1
09_04_0628 + 19093665-19094033,19094408-19094722 30 3.1
07_03_0364 - 17281356-17281820 30 3.1
03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648 29 7.1
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 29 7.1
01_07_0083 + 40970890-40971015,40971886-40971994,40972679-409727... 28 9.4
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 81.0 bits (191), Expect = 1e-15
Identities = 37/67 (55%), Positives = 47/67 (70%)
Frame = +3
Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLY 338
DTVRRRMMMQSG +Y +T+ CW I K EG +F++GA SN+ R TG A +LVLY
Sbjct: 272 DTVRRRMMMQSGMDVQ--MYSSTLDCWRKIYKVEGIKSFYRGALSNMFRSTGAAAILVLY 329
Query: 339 DEIKKVL 359
DE+KK +
Sbjct: 330 DEVKKFM 336
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 61.3 bits (142), Expect = 1e-09
Identities = 31/64 (48%), Positives = 43/64 (67%)
Frame = +3
Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLY 338
DTVRRRMMM SG A + YK+++ ++ I K EG + FKGA +N+LR GA VL Y
Sbjct: 309 DTVRRRMMMTSGEA---VKYKSSMDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLSGY 365
Query: 339 DEIK 350
D+++
Sbjct: 366 DQLQ 369
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 58.4 bits (135), Expect = 8e-09
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = +3
Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLY 338
DTVRRRMMM SG A + Y +++ + I EG + FKGA +N+LR GA VL Y
Sbjct: 307 DTVRRRMMMTSGEA---VKYNSSLDAFKQIVAKEGAKSLFKGAGANILRAVAGAGVLAGY 363
Query: 339 DEIKKVL 359
D+++ V+
Sbjct: 364 DKLQVVV 370
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 180 MMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 305
M++SGR YK C+ K EG A ++G +NV+R
Sbjct: 114 MIKSGRLSHP--YKGIADCFGRTIKDEGVIALWRGNTANVIR 153
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 58.0 bits (134), Expect = 1e-08
Identities = 29/66 (43%), Positives = 39/66 (59%)
Frame = +3
Query: 156 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVL 335
FDT+RRRMM+ SG+ + YKN H I TEG F+G +N+L G GA VL
Sbjct: 249 FDTLRRRMMLTSGQP---LKYKNAFHAAKQIVSTEGFFTLFRGVGANILSGMAGAGVLAG 305
Query: 336 YDEIKK 353
YD++ +
Sbjct: 306 YDQLHR 311
>03_02_0646 + 10141967-10142476,10143721-10144254
Length = 347
Score = 39.1 bits (87), Expect = 0.005
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 156 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLV 332
FD V+ R+M Q GR DI YK +H TI EG A +KG ++R G A +
Sbjct: 271 FDVVKTRLMAQ-GRT-GDIKYKGMVHAIRTIYTEEGLRALWKGLLPRLMRIPPGQAIMWA 328
Query: 333 LYDEI 347
+ D++
Sbjct: 329 VADQV 333
Score = 36.3 bits (80), Expect = 0.035
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 165 VRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGA 320
V+ R+ Q G + + YK IHC TI EG + GA V+R GT A
Sbjct: 172 VKIRLQQQKGLSPDLLRYKGPIHCARTIVTEEGLFGLWAGALPTVMRNGTNQA 224
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 284
D ++ R+ + A Y+ HC T+ ++EG A +KG
Sbjct: 61 DVIKTRLQLDRSGA-----YRGIAHCGTTVVRSEGVRALWKG 97
>03_05_1041 -
29884975-29885107,29885485-29885552,29885652-29885816,
29886262-29886372,29886999-29887072,29887387-29887480,
29887750-29887849,29888075-29888151,29888856-29888935,
29889025-29889157
Length = 344
Score = 37.9 bits (84), Expect = 0.012
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 159 DTVRRRMMMQSGRAKSDIL-YKNTIHCWATIAKTEGTSAFFKGAFSNVLRGT 311
D VR R + GR D+ Y+NT H TIA++EG + G + VL T
Sbjct: 37 DVVRTRFQVSGGRGCYDLPPYRNTAHAVYTIARSEGLRGLYAGFYPAVLGST 88
>01_07_0386 +
43218686-43218745,43218972-43219190,43219307-43219391,
43219583-43219713,43219802-43219900,43219984-43220088,
43220190-43220264,43222006-43222092,43222129-43222173
Length = 301
Score = 36.3 bits (80), Expect = 0.035
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 195 RAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 305
R D YK+T+ C+A K +G AF+KG +N R
Sbjct: 237 RMMGDATYKSTLDCFAKTLKNDGLPAFYKGFIANFCR 273
>04_04_0048 + 22351788-22352177,22353175-22353711
Length = 308
Score = 35.9 bits (79), Expect = 0.047
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVL-VL 335
D ++ RMM Q AK +LY+N+ C K EG +A +KG R FV V
Sbjct: 238 DVIKTRMMNQGKDAK--VLYRNSYDCLVKTVKHEGLTALWKGFLPTWARLGPWQFVFWVS 295
Query: 336 YDEIKK 353
Y+++++
Sbjct: 296 YEKLRQ 301
>11_08_0097 +
28330565-28330645,28330768-28330986,28331066-28331144,
28331222-28331355,28331447-28331545,28331638-28331742,
28332377-28332451,28333671-28333757,28333854-28333889
Length = 304
Score = 34.7 bits (76), Expect = 0.11
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 195 RAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVLYDEIKKV 356
R D Y +TI C+ K +G AF+KG N R G+ + + ++++K+
Sbjct: 243 RMMGDSAYTSTIDCFVKTLKNDGPLAFYKGFLPNFARLGSWNVIMFLTLEQVQKL 297
Score = 29.9 bits (64), Expect = 3.1
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 159 DTVRRRMMMQSG-RAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRG-TGGAFVLV 332
DT + R+ +Q A + Y+ + ATIA+ EG +A +KG + R G +
Sbjct: 34 DTAKVRLQLQKNVAADAAPKYRGLLGTAATIAREEGAAALWKGIVPGLHRQCIYGGLRIG 93
Query: 333 LYDEIKKV 356
LY+ ++ V
Sbjct: 94 LYEPVRTV 101
>12_02_0618 -
21262021-21262117,21262429-21262466,21262933-21262986,
21263274-21263438,21263523-21263759,21263857-21263918,
21264543-21264656,21264816-21264942,21266200-21266218,
21266338-21266428,21266932-21267094,21267182-21267330,
21268147-21268287,21268368-21268533,21268568-21268631,
21268729-21269084,21269759-21269977,21270328-21270433,
21270713-21270942
Length = 865
Score = 34.3 bits (75), Expect = 0.14
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 213 LYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVLYDEIKKV 356
+Y+N HC + TEG ++ +KG F+ R G A V+ ++++++
Sbjct: 811 VYRNGFHCGYQVVVTEGVTSLYKGGFATFARLGPQTAITFVVCEKLREL 859
>09_04_0437 - 17587944-17588909
Length = 321
Score = 32.3 bits (70), Expect = 0.58
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +3
Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLY 338
D V+ R+M A + Y + C ++EG A +KG V R G F +VL+
Sbjct: 249 DVVKTRVMNMKVVAGAPPPYSGALDCLIKTVRSEGAMALYKGFVPTVTR--QGPFTIVLF 306
Query: 339 DEIKKV 356
+++V
Sbjct: 307 VTLEQV 312
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 31.9 bits (69), Expect = 0.76
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 174 RMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFV-LVLYDEIK 350
R MQ G +YKN H I + EG +KG + ++ A + + Y+ K
Sbjct: 349 RKQMQVGAVGGRQVYKNVFHALYCIMENEGIGGLYKGLGPSCIKLMPAAGISFMCYEACK 408
Query: 351 KVL 359
K+L
Sbjct: 409 KIL 411
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 243 TIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVLYDEIKKVL 359
+I KTEG + F+G F NV+R A L +D KK L
Sbjct: 179 SIMKTEGWTGLFRGNFVNVIRVAPSKAIELFAFDTAKKFL 218
>08_02_1016 - 23606089-23607072
Length = 327
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLY 338
D V+ R+M + Y I C ++EG A +KG V R G F +VL+
Sbjct: 255 DVVKTRVMNMKVAPGAPPPYSGAIDCALKTVRSEGVMALYKGFIPTVSR--QGPFTVVLF 312
Query: 339 DEIKKV 356
+++V
Sbjct: 313 VTLEQV 318
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVL 335
D VR R+ Q K+ YK H +TI + EG +KG + +L G A +
Sbjct: 134 DVVRTRLATQ----KTTRYYKGIFHAVSTICRDEGVKGLYKGLGATLLGVGPSIAISFTV 189
Query: 336 YDEIK 350
Y+ ++
Sbjct: 190 YESLR 194
>11_04_0086 +
13362788-13362937,13363887-13363970,13364233-13364294,
13365146-13365507,13365928-13366142,13366236-13366292
Length = 309
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 216 YKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTG-GAFVLVLYDE 344
YKN H IA EG A +KGA V+R +L YD+
Sbjct: 158 YKNAFHALYRIAADEGVLALWKGAGPTVVRAMSLNMGMLASYDQ 201
>09_04_0628 + 19093665-19094033,19094408-19094722
Length = 227
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 227 GVLVQDIALGTTRLHHHAPTD 165
G V+ +ALG LHHHAP D
Sbjct: 8 GGAVEGLALGIAPLHHHAPCD 28
>07_03_0364 - 17281356-17281820
Length = 154
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -2
Query: 231 GWCSCTGYRSWHDQTA--SSCAYGLCRRXKEMIPATVVTGLSD 109
GW C G + HD A S+ AY L RR +++ PAT L D
Sbjct: 42 GWSRCEGV-AVHDDRAGRSAAAYPLRRRHQQLPPATAGHALLD 83
>03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648
Length = 365
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFV-LVL 335
DTV++R+ + S Y HC T+ + EG AFF + V+ V
Sbjct: 159 DTVKQRLQLTSSP------YTGVSHCVRTVLRDEGLGAFFASYRTTVVMNAPYTAVHFAT 212
Query: 336 YDEIKKVL 359
Y+ K++L
Sbjct: 213 YEAAKRML 220
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +3
Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGG-AFVLVL 335
D VRRRM ++ ++ + + I +TE ++G + V +
Sbjct: 259 DLVRRRMQLEGAAGRARVYQTGLFGTFGHIVRTESLRGLYRGILPEYCKVVPSVGIVFMT 318
Query: 336 YDEIKKVL 359
Y+ +K +L
Sbjct: 319 YETLKSIL 326
>01_07_0083 +
40970890-40971015,40971886-40971994,40972679-40972790,
40972944-40973100,40973609-40973761,40974143-40974292,
40974803-40974999,40975446-40975473
Length = 343
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 216 YKNTIHCWATIAKTEGTSAFFKGAFSNVLRGT-GGAFVLVLYDEI 347
YK H I EG +KG F ++++ GA V Y+ I
Sbjct: 288 YKGMYHALKEIVAKEGFGGLYKGLFPSLVKSAPAGAVTFVAYEYI 332
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,978,149
Number of Sequences: 37544
Number of extensions: 206795
Number of successful extensions: 471
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -