Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_E12
         (943 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical pr...    95   5e-20
U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical pr...    95   5e-20
Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical pr...    95   9e-20
AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical ...    88   1e-17
X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP translo...    80   3e-15
Z49207-2|CAA89069.1|  298|Caenorhabditis elegans Hypothetical pr...    68   9e-12
U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical pr...    67   2e-11
Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical pr...    50   3e-06
Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical pr...    40   0.003
Z75532-5|CAD56651.1|  360|Caenorhabditis elegans Hypothetical pr...    35   0.073
Z75532-4|CAA99811.1|  310|Caenorhabditis elegans Hypothetical pr...    35   0.073
U00052-8|AAK21421.2|  707|Caenorhabditis elegans Hypothetical pr...    35   0.073
Z78542-7|CAB01750.1|  300|Caenorhabditis elegans Hypothetical pr...    35   0.097
Z22180-4|CAA80178.1|  312|Caenorhabditis elegans Hypothetical pr...    33   0.30 
AF003384-5|AAB54239.2|  324|Caenorhabditis elegans Uncoupling pr...    33   0.39 

>Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical
           protein K01H12.2 protein.
          Length = 313

 Score = 95.5 bits (227), Expect = 5e-20
 Identities = 46/68 (67%), Positives = 52/68 (76%)
 Frame = +3

Query: 156 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVL 335
           +DTVRRRMMMQSGR   D+LYKNT+ C   I K EG SA FKGA SNV RGTGGA VL +
Sbjct: 248 WDTVRRRMMMQSGR--KDVLYKNTLDCAVKIIKNEGMSAMFKGALSNVFRGTGGALVLAI 305

Query: 336 YDEIKKVL 359
           YDEI+K +
Sbjct: 306 YDEIQKFI 313


>U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical
           protein T01B11.4 protein.
          Length = 313

 Score = 95.5 bits (227), Expect = 5e-20
 Identities = 46/68 (67%), Positives = 52/68 (76%)
 Frame = +3

Query: 156 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVL 335
           +DTVRRRMMMQSGR   D+LYKNT+ C   I K EG SA FKGA SNV RGTGGA VL +
Sbjct: 248 WDTVRRRMMMQSGR--KDVLYKNTLDCAVKIIKNEGMSAMFKGALSNVFRGTGGALVLAI 305

Query: 336 YDEIKKVL 359
           YDEI+K +
Sbjct: 306 YDEIQKFI 313


>Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical
           protein T27E9.1a protein.
          Length = 300

 Score = 94.7 bits (225), Expect = 9e-20
 Identities = 47/68 (69%), Positives = 52/68 (76%)
 Frame = +3

Query: 156 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVL 335
           +DTVRRRMMMQSGR   DILYKNT+ C   I + EG SA FKGA SNV RGTGGA VL +
Sbjct: 235 WDTVRRRMMMQSGR--KDILYKNTLDCAKKIIQNEGMSAMFKGALSNVFRGTGGALVLAI 292

Query: 336 YDEIKKVL 359
           YDEI+K L
Sbjct: 293 YDEIQKFL 300


>AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical
           protein W02D3.6 protein.
          Length = 300

 Score = 87.8 bits (208), Expect = 1e-17
 Identities = 42/68 (61%), Positives = 50/68 (73%)
 Frame = +3

Query: 156 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVL 335
           +DTVRRRMMMQSGR   DILYKNT+ C   I K EG +A +KG  SNV R TGGA VL +
Sbjct: 235 WDTVRRRMMMQSGR--KDILYKNTLDCVRKIVKNEGITALYKGGLSNVFRATGGALVLTI 292

Query: 336 YDEIKKVL 359
           YDEI+ ++
Sbjct: 293 YDEIQHLI 300



 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 204 SDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 305
           +D  YK  +   A + K +G +AF++G  +NVLR
Sbjct: 51  ADKKYKGIMDVLARVPKEQGYAAFWRGNLANVLR 84


>X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP
           translocase protein.
          Length = 300

 Score = 79.8 bits (188), Expect = 3e-15
 Identities = 43/68 (63%), Positives = 46/68 (67%)
 Frame = +3

Query: 156 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVL 335
           +DTVRRRMMMQSGR   DILYK            EG SA FKGA SNV RGTGGA VL +
Sbjct: 235 WDTVRRRMMMQSGR--KDILYKKHPRLRKEDHPNEGMSAMFKGALSNVFRGTGGALVLAI 292

Query: 336 YDEIKKVL 359
           YDEI+K L
Sbjct: 293 YDEIQKFL 300


>Z49207-2|CAA89069.1|  298|Caenorhabditis elegans Hypothetical
           protein R07E3.4 protein.
          Length = 298

 Score = 68.1 bits (159), Expect = 9e-12
 Identities = 31/67 (46%), Positives = 42/67 (62%)
 Frame = +3

Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLY 338
           DTVRR MMMQSG+      Y +T  CW T+ K +G + F++GA +N LR TGGA ++  Y
Sbjct: 234 DTVRRSMMMQSGKQIKQ--YTSTKDCWKTLYKKDGINGFYRGALTNSLRSTGGALIITFY 291

Query: 339 DEIKKVL 359
            E  K +
Sbjct: 292 YEFSKYM 298


>U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical
           protein F25B4.7 protein.
          Length = 306

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 33/67 (49%), Positives = 43/67 (64%)
 Frame = +3

Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLY 338
           DTVRRR+MM +G  K  + + NTI C   I   EG  AFF GA  N +RGTG A VL +Y
Sbjct: 242 DTVRRRLMMGAG--KKTLPFNNTISCIKYIYTKEGPKAFFHGALVNAIRGTGAALVLAIY 299

Query: 339 DEIKKVL 359
           +E++K +
Sbjct: 300 NELQKYM 306



 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 284
           D +R R+ +  G+ KSD  +     C   I K++G    +KG
Sbjct: 145 DFIRTRLAIDLGKRKSDREFTGMFDCAKKIIKSDGVPGLYKG 186


>Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical
           protein C47E12.2 protein.
          Length = 306

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 26/66 (39%), Positives = 34/66 (51%)
 Frame = +3

Query: 156 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVL 335
           +DTVRRRMM+     K  +           I   EG    +KGA +N+ R  GGA V+ L
Sbjct: 244 WDTVRRRMMV-----KGQLSTSKAFSAARKIVHEEGVRGLYKGALANIFRSAGGALVMAL 298

Query: 336 YDEIKK 353
           Y+EI K
Sbjct: 299 YEEIHK 304


>Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical
           protein R11.1 protein.
          Length = 289

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +3

Query: 216 YKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVLYDEI 347
           Y  T+   + + K EG  A +KG    V+R G GGA +L++YDE+
Sbjct: 237 YSGTMQTISLVYKEEGFGALYKGLLPKVMRLGPGGAVMLIVYDEV 281


>Z75532-5|CAD56651.1|  360|Caenorhabditis elegans Hypothetical
           protein C54G10.4b protein.
          Length = 360

 Score = 35.1 bits (77), Expect = 0.073
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +3

Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVL 302
           DTV+ R+  QSG       Y+ T HC+  I + EG    +KG  S +L
Sbjct: 25  DTVKVRLQTQSGPTPQ---YRGTFHCFKLIVQKEGFRGLYKGMSSPLL 69


>Z75532-4|CAA99811.1|  310|Caenorhabditis elegans Hypothetical
           protein C54G10.4a protein.
          Length = 310

 Score = 35.1 bits (77), Expect = 0.073
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +3

Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVL 302
           DTV+ R+  QSG       Y+ T HC+  I + EG    +KG  S +L
Sbjct: 25  DTVKVRLQTQSGPTPQ---YRGTFHCFKLIVQKEGFRGLYKGMSSPLL 69


>U00052-8|AAK21421.2|  707|Caenorhabditis elegans Hypothetical
           protein K02F3.2 protein.
          Length = 707

 Score = 35.1 bits (77), Expect = 0.073
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +3

Query: 159 DTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVL 302
           D V+ RM  Q  SG    +++YKN++ C+  + K EG    ++G    ++
Sbjct: 391 DLVKTRMQNQRTSGSFVGEVMYKNSLDCFKKVVKFEGLLGLYRGLLPQIV 440


>Z78542-7|CAB01750.1|  300|Caenorhabditis elegans Hypothetical
           protein F20D1.9 protein.
          Length = 300

 Score = 34.7 bits (76), Expect = 0.097
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = +3

Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGA 287
           D ++ RM   + +  ++I+YKN    + TI K EG  A FKGA
Sbjct: 224 DVIKTRMQTIN-KGANEIVYKNIPDAFVTIFKNEGPKALFKGA 265


>Z22180-4|CAA80178.1|  312|Caenorhabditis elegans Hypothetical
           protein K11H3.3 protein.
          Length = 312

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 28/70 (40%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = +3

Query: 159 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGA---FSNVLRGTGGAFVL 329
           D V+ RM  Q   AK    YKNT+ C   I K EG  AF+KG     S V    G  F  
Sbjct: 242 DVVKTRM--QGLEAKK---YKNTLDCAMQIWKKEGFFAFYKGTVPRLSRVCLDVGITF-- 294

Query: 330 VLYDEIKKVL 359
           ++YD I + L
Sbjct: 295 MIYDSIIEFL 304


>AF003384-5|AAB54239.2|  324|Caenorhabditis elegans Uncoupling
           protein (mitochondrialsubstrate carrier) protein 4
           protein.
          Length = 324

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 213 LYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVL-VLYDEIKK 353
           LYK  + C+  I K EG  + +KG   + +R    +    V Y+EI+K
Sbjct: 270 LYKGVVDCYIKIIKNEGFFSLYKGFLPSYIRMAPWSLTFWVSYEEIRK 317


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,792,367
Number of Sequences: 27780
Number of extensions: 164294
Number of successful extensions: 436
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)