Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_E07
         (865 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0382 - 22501041-22501279,22501717-22501810                       32   0.68 
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008           32   0.68 
03_06_0471 + 34169562-34169892,34170121-34170347                       31   0.90 
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.4  
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814...    28   8.4  
05_05_0153 - 22766805-22767023,22767662-22767940,22768294-227684...    28   8.4  

>02_04_0382 - 22501041-22501279,22501717-22501810
          Length = 110

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
 Frame = +1

Query: 97  KFFMIFVLALLA--MANAQDPVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPI 270
           K  ++F L L A  +A+A+      +N      +E     P   +PP    P+ + Y+P 
Sbjct: 11  KALLVFALLLAAAFVASAEQTHDDGDNPPESPDHEDPPPSPEYYDPP----PSPDYYDPP 66

Query: 271 DNGAYYVDRPQGRPYFKPTPFPGARGG 351
            +  YY D P    Y+ P P P   GG
Sbjct: 67  HSPDYY-DPPPSPDYYDPPPSPYYGGG 92


>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
          Length = 580

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
 Frame = +1

Query: 151 PVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDRPQGRPYFK 321
           P    +  +    Y P  + P  V PP  Y P  +G  P     N + Y + P GRP   
Sbjct: 381 PPAAPQQPEEAMSYAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSG 439

Query: 322 PTPFPGARG 348
           P P  GA G
Sbjct: 440 PPPSYGAGG 448


>03_06_0471 + 34169562-34169892,34170121-34170347
          Length = 185

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +1

Query: 190 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPFPG 339
           Y P    P    PP  Y P+  GY P   GAY       +P + P  +PG
Sbjct: 56  YPPAGGYPGAQYPPSGYPPSQGGYPP---GAYPPSGYPQQPGYPPAGYPG 102


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 659 NESAN---ARGEAVCVLGALPLPRSLTRCAR 742
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_0874 -
           25580417-25580419,25580504-25580604,25580828-25581411,
           25581523-25581594,25581667-25581793,25583412-25583516,
           25583643-25583676
          Length = 341

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +1

Query: 181 GNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPF 333
           G  Y+P   R     PP+   P    Y P   G  Y  +PQG+PY  P P+
Sbjct: 247 GETYQPQPQRE--TYPPQ---PQVQPYPPKPQGQPYPPQPQGQPY-PPQPY 291


>05_05_0153 -
           22766805-22767023,22767662-22767940,22768294-22768401,
           22768500-22768779,22768871-22769174,22769367-22769975,
           22770186-22770411
          Length = 674

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 108 HEEFHFYMITSYHRRKY*SCQNLKEFPIV 22
           HEE+  + +  +HR+     +  KEFPIV
Sbjct: 364 HEEYEVFELRIFHRKNRTGFEENKEFPIV 392


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,288,792
Number of Sequences: 37544
Number of extensions: 376960
Number of successful extensions: 993
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)