Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_D19
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 168 4e-42
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 168 4e-42
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 149 2e-36
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 149 2e-36
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 96 3e-20
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 85 6e-17
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 85 6e-17
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 72 6e-13
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 71 1e-12
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 71 1e-12
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 71 1e-12
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 70 3e-12
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 70 3e-12
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 70 3e-12
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 69 6e-12
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 68 1e-11
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 66 3e-11
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 66 3e-11
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 66 3e-11
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 66 3e-11
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 66 3e-11
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 64 9e-11
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 61 1e-09
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 60 3e-09
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 60 3e-09
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 60 3e-09
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 59 4e-09
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 59 5e-09
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 58 6e-09
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 56 3e-08
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 55 8e-08
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 52 5e-07
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 52 7e-07
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 51 9e-07
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 51 9e-07
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 51 9e-07
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 51 1e-06
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 51 1e-06
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 51 1e-06
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 50 3e-06
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 50 3e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 48 7e-06
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 48 7e-06
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 48 7e-06
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 48 1e-05
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 43 2e-04
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 43 2e-04
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 42 8e-04
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 37 0.016
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.15
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 32 0.47
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.81
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 30 2.5
Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical pr... 29 5.7
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 5.7
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 5.7
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 168 bits (409), Expect = 4e-42
Identities = 80/109 (73%), Positives = 92/109 (84%)
Frame = +2
Query: 545 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 724
K RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++
Sbjct: 62 KARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYM 121
Query: 725 NAKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMIPRRALHANTIK 871
N +CHACIGGTN+ EDIR+L+ G HVV GTP RV+DMI RR L IK
Sbjct: 122 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIK 170
Score = 62.5 bits (145), Expect = 4e-10
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +1
Query: 430 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGTR 555
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ P I R
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAV-PAILKAR 64
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 168 bits (409), Expect = 4e-42
Identities = 80/109 (73%), Positives = 92/109 (84%)
Frame = +2
Query: 545 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 724
K RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++
Sbjct: 62 KARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYM 121
Query: 725 NAKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMIPRRALHANTIK 871
N +CHACIGGTN+ EDIR+L+ G HVV GTP RV+DMI RR L IK
Sbjct: 122 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIK 170
Score = 62.5 bits (145), Expect = 4e-10
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +1
Query: 430 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGTR 555
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI P I R
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAI-PAILKAR 64
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 149 bits (362), Expect = 2e-36
Identities = 74/108 (68%), Positives = 88/108 (81%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 727
G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 728 AKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMIPRRALHANTIK 871
CIGGT+VR+D R+LE+G+HVVVGTP RV DMI R AL + IK
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIK 173
Score = 81.0 bits (191), Expect = 1e-15
Identities = 35/49 (71%), Positives = 43/49 (87%)
Frame = +1
Query: 403 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 549
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTG 66
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 149 bits (362), Expect = 2e-36
Identities = 74/108 (68%), Positives = 88/108 (81%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 727
G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 728 AKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMIPRRALHANTIK 871
CIGGT+VR+D R+LE+G+HVVVGTP RV DMI R AL + IK
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIK 173
Score = 81.0 bits (191), Expect = 1e-15
Identities = 35/49 (71%), Positives = 43/49 (87%)
Frame = +1
Query: 403 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 549
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTG 66
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 95.9 bits (228), Expect = 3e-20
Identities = 38/103 (36%), Positives = 70/103 (67%)
Frame = +2
Query: 536 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 715
+A G+D++A+A++GTGKT + I ++++I +++ QA+++ PTRELA Q ++ + L
Sbjct: 76 VALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELS 135
Query: 716 DHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMIPR 844
H+ K GGT++R+DI +L VH+V+ TP R+ D++ +
Sbjct: 136 KHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLMEK 178
Score = 34.7 bits (76), Expect = 0.087
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 442 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 549
F+D L +LL GI+ G+EKPS IQ+ +I + G
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTG 80
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 85.0 bits (201), Expect = 6e-17
Identities = 43/98 (43%), Positives = 59/98 (60%)
Frame = +2
Query: 545 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 724
+G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG +
Sbjct: 125 EGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPI 184
Query: 725 NAKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMI 838
KC +GG ++ R+L HVVV TP R+ D+I
Sbjct: 185 TLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLI 222
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 85.0 bits (201), Expect = 6e-17
Identities = 43/98 (43%), Positives = 59/98 (60%)
Frame = +2
Query: 545 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 724
+G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG +
Sbjct: 125 EGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPI 184
Query: 725 NAKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMI 838
KC +GG ++ R+L HVVV TP R+ D+I
Sbjct: 185 TLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLI 222
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 71.7 bits (168), Expect = 6e-13
Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Frame = +2
Query: 536 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKV 700
+A GRD+I+ A++G+GKT F + L I + L+L PTRELAQQ+Q+V
Sbjct: 162 IAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEV 221
Query: 701 VIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMI 838
I L K GG + R LE GV +VV TP R+ D +
Sbjct: 222 SIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFL 267
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 70.9 bits (166), Expect = 1e-12
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 10/116 (8%)
Frame = +2
Query: 545 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRELAQQIQ 694
+ RDVI A++G+GKTA F + +L I TS+ + + A+I+APTRELAQQI+
Sbjct: 337 QNRDVIGVAETGSGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIE 395
Query: 695 KVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMIPRRALHAN 862
+ G L K + IGG + + +L GV VV+ TP R+ D++ R L N
Sbjct: 396 EETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLN 451
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDHL 724
G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT 120
Query: 725 NAKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMIPRRALHANTIK 871
+C +GG + E + +++ TP R+ +I L + ++
Sbjct: 121 GLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQ 169
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDHL 724
G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT 120
Query: 725 NAKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMIPRRALHANTIK 871
+C +GG + E + +++ TP R+ +I L + ++
Sbjct: 121 GLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQ 169
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 69.7 bits (163), Expect = 3e-12
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = +2
Query: 554 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 730
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 309
Query: 731 KCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMIPR 844
K H I G N+ +R + +V+GTP D + +
Sbjct: 310 KIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRDYLQK 346
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 69.7 bits (163), Expect = 3e-12
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = +2
Query: 554 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 730
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 334
Query: 731 KCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMIPR 844
K H I G N+ +R + +V+GTP D + +
Sbjct: 335 KIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRDYLQK 371
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 69.7 bits (163), Expect = 3e-12
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = +2
Query: 554 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 730
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718
Query: 731 KCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMIPR 844
K H I G N+ +R + +V+GTP D + +
Sbjct: 719 KIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRDYLQK 755
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 68.5 bits (160), Expect = 6e-12
Identities = 36/98 (36%), Positives = 54/98 (55%)
Frame = +2
Query: 539 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 718
A +G+DVI A++G+GKT F+I +LQ + + L+L PTRELA QI + ALG
Sbjct: 78 ALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGS 137
Query: 719 HLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYD 832
+ +GG ++ L H++V TP R+ D
Sbjct: 138 GIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVD 175
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 412 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 549
D + D ++F ++ + + L G+ KPS IQQ A+ +QG
Sbjct: 36 DDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQG 81
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 67.7 bits (158), Expect = 1e-11
Identities = 39/121 (32%), Positives = 67/121 (55%), Gaps = 14/121 (11%)
Frame = +2
Query: 536 LASKGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQA---LILAPTRELAQQI 691
+A GRD+I A +G+GKT TF + ++ Q++ + LI+ P+RELA+QI
Sbjct: 223 VALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
Query: 692 QKVVIALGDHLNA------KCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMIPRRAL 853
++I + D L + CIGG + E + + G+H+VV TP R+ DM+ ++ +
Sbjct: 283 FDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKII 342
Query: 854 H 856
+
Sbjct: 343 N 343
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 66.1 bits (154), Expect = 3e-11
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 724
G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 78 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 137
Query: 725 NAKCHACIGGTNVREDIRQLESGV-HVVVGTPXRVYDMIPRRALHANTIK 871
K GG +++D +L + H+VVGTP R+ + L + +K
Sbjct: 138 GVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVK 187
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 66.1 bits (154), Expect = 3e-11
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 724
G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 78 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 137
Query: 725 NAKCHACIGGTNVREDIRQLESGV-HVVVGTPXRVYDMIPRRALHANTIK 871
K GG +++D +L + H+VVGTP R+ + L + +K
Sbjct: 138 GVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVK 187
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 66.1 bits (154), Expect = 3e-11
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 724
G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L
Sbjct: 77 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLP 136
Query: 725 NAKCHACIGGTNVREDIRQLESGV-HVVVGTPXRVYDMIPRRALHANTIK 871
K GG +++D +L + H+VVGTP R+ + L + +K
Sbjct: 137 GVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVK 186
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 66.1 bits (154), Expect = 3e-11
Identities = 33/108 (30%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 727
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V +
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TG 117
Query: 728 AKCHACIGGTNVREDIRQL-ESGVHVVVGTPXRVYDMIPRRALHANTI 868
A+ +GG+ + ++ L ++ +V+GTP R+ ++ A++ + +
Sbjct: 118 ARTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHV 165
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 66.1 bits (154), Expect = 3e-11
Identities = 33/108 (30%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 727
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V +
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TG 117
Query: 728 AKCHACIGGTNVREDIRQL-ESGVHVVVGTPXRVYDMIPRRALHANTI 868
A+ +GG+ + ++ L ++ +V+GTP R+ ++ A++ + +
Sbjct: 118 ARTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHV 165
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 66.1 bits (154), Expect = 3e-11
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Frame = +2
Query: 536 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELAQQIQKVVI 706
+A G+D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA Q+ +V
Sbjct: 181 VALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFR 240
Query: 707 ALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYD 832
L + + C GG +++ L SG VVV TP R+ D
Sbjct: 241 KLSTFIQLEVCLCAGGLDLKAQEAALRSGPDVVVATPGRLID 282
Score = 31.9 bits (69), Expect = 0.62
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +1
Query: 337 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 510
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 511 AIQQRAIMPCIQG 549
IQQ I + G
Sbjct: 173 PIQQACIPVALTG 185
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 64.5 bits (150), Expect = 9e-11
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKVVIAL 712
GRDVI A++G+GKT F + + + I + E A+ILAPTRELA Q K
Sbjct: 341 GRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKF 400
Query: 713 GDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMI 838
L K GG + E I L+ G +VV TP R+ D++
Sbjct: 401 AKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVL 442
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 60.9 bits (141), Expect = 1e-09
Identities = 36/98 (36%), Positives = 53/98 (54%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 727
G+DV Q+Q+G+GKT I ILQ ID Q ++LAP R +AQ+ + + +LG +LN
Sbjct: 33 GKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLN 92
Query: 728 AKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMIP 841
C+G E+ + HV++GTP IP
Sbjct: 93 VNA-TCLGFDTTAEN----DKISHVLMGTPKDFLSNIP 125
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +1
Query: 451 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 549
M LKEELLRGIY +GFEKPSAIQ+ A+ PC G
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTG 33
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 59.7 bits (138), Expect = 3e-09
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 16/112 (14%)
Frame = +2
Query: 551 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 685
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 236
Query: 686 QIQKVVIALGDHLNAKCHACIGGT-NVREDIRQLESGVHVVVGTPXRVYDMI 838
QI K N + GG N R+ + +L +G H+++ TP R+ D+I
Sbjct: 237 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII 288
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 59.7 bits (138), Expect = 3e-09
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 16/112 (14%)
Frame = +2
Query: 551 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 685
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 220
Query: 686 QIQKVVIALGDHLNAKCHACIGGT-NVREDIRQLESGVHVVVGTPXRVYDMI 838
QI K N + GG N R+ + +L +G H+++ TP R+ D+I
Sbjct: 221 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII 272
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 59.7 bits (138), Expect = 3e-09
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 16/112 (14%)
Frame = +2
Query: 551 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 685
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 217
Query: 686 QIQKVVIALGDHLNAKCHACIGGT-NVREDIRQLESGVHVVVGTPXRVYDMI 838
QI K N + GG N R+ + +L +G H+++ TP R+ D+I
Sbjct: 218 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII 269
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 59.3 bits (137), Expect = 4e-09
Identities = 31/99 (31%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Frame = +2
Query: 554 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 724
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+ + L
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 725 NAKCHACIGGTNVREDIRQLES-GVHVVVGTPXRVYDMI 838
N GG V ++I+ ++ V+++V TP R++ +I
Sbjct: 108 NLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQII 146
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 58.8 bits (136), Expect = 5e-09
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 727
G +A AQ+ G +S + ID+S C +IL PTREL QQ + + L+
Sbjct: 252 GTQYVAVAQAEDGNLKWWSAAEQLSIDSSTPLC--VILEPTRELVQQTFQNIQTFASVLD 309
Query: 728 A---KCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMI 838
+ +C G N+ + +R LE+G +VVGTP RV+D+I
Sbjct: 310 SPKIRCVTLAAGENMNQILRTLETGCDIVVGTPSRVFDLI 349
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSISILQ 619
G D + A++G+GKT FS+ I Q
Sbjct: 39 GADALIAAETGSGKTGAFSLPIAQ 62
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 58.4 bits (135), Expect = 6e-09
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----ALILAPTRELAQQIQKVVIALG 715
G DV+ A++G+GKT I +L+ + + ALI++PTRELA Q + A+G
Sbjct: 113 GSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINAVG 172
Query: 716 DHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMIPRRA 850
H C IGG++V + R SG++++V TP R+ + A
Sbjct: 173 AHHGFSCGLVIGGSDVAFE-RNRISGINIIVCTPGRLLQHMDENA 216
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Frame = +2
Query: 545 KGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIAL 712
+G+DV+A A++G+GKT F +I +L +++ +I++PTREL+ Q V+ L
Sbjct: 104 EGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSEL 163
Query: 713 GDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYD 832
+ N +GG+N + +L GV ++V TP R+ D
Sbjct: 164 LEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATPGRLLD 203
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 54.8 bits (126), Expect = 8e-08
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 12/112 (10%)
Frame = +2
Query: 536 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILAPTRELA 682
L G+D I +Q+G+GKT F + L ID + + + L+L+PTRELA
Sbjct: 117 LLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELA 176
Query: 683 QQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGVHVVVGTPXRVYDM 835
QQI+ V N C+ GG + E + GV +V+ TP R+ D+
Sbjct: 177 QQIEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDL 226
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 52.0 bits (119), Expect = 5e-07
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQ-----ALILAPTRELAQQIQK 697
G DV+ QA++ GKTA F + I+ +I +T + Q ALILAPTRELA QI +
Sbjct: 418 GHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477
Query: 698 VVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYD 832
+ + + G ++ + ++ +G +++GT R+ D
Sbjct: 478 ALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCDILIGTCGRIMD 522
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 51.6 bits (118), Expect = 7e-07
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 7/111 (6%)
Frame = +2
Query: 536 LASKGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQ 694
LA + ++++ +A++G+GKT F I ++Q++ D S+ A+I+APT+EL QI
Sbjct: 122 LALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIY 180
Query: 695 KVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRVYDMIPRR 847
K+ + L L + N E+ LE HVVV TP ++ M R
Sbjct: 181 KLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLLRMCSLR 231
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 400 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 531
P + D++ +TF D L E +L+ I G+EK + +Q+ I
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVI 120
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 51.2 bits (117), Expect = 9e-07
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Frame = +2
Query: 536 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 688
L +G D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA Q
Sbjct: 374 LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
Query: 689 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRV 826
I + GG V + Q+E G ++VGT R+
Sbjct: 434 IYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 51.2 bits (117), Expect = 9e-07
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Frame = +2
Query: 536 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 688
L +G D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA Q
Sbjct: 374 LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
Query: 689 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRV 826
I + GG V + Q+E G ++VGT R+
Sbjct: 434 IYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 51.2 bits (117), Expect = 9e-07
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Frame = +2
Query: 536 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 688
L +G D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA Q
Sbjct: 374 LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
Query: 689 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRV 826
I + GG V + Q+E G ++VGT R+
Sbjct: 434 IYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRI 479
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 50.8 bits (116), Expect = 1e-06
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Frame = +2
Query: 539 ASKGRDVIAQAQSGTGKTATF----SISILQQIDTSIRECQ-ALILAPTRELAQQIQKVV 703
A GRDV+ A++G+GKTA + + I+ Q D E A+I+ PTRELA Q+ +
Sbjct: 299 ALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEA 358
Query: 704 IALGDHLNAKCHACIGGTNVREDIRQLES-GVHVVVGTPXRVYDMI 838
N GG + E +L++ G +VV TP R+ D++
Sbjct: 359 KKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLV 404
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 50.8 bits (116), Expect = 1e-06
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Frame = +2
Query: 536 LASKGRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQ 688
L + G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA Q
Sbjct: 331 LVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQ 390
Query: 689 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRV 826
I + GG NV + Q+ G ++VGT RV
Sbjct: 391 IYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRV 436
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 50.8 bits (116), Expect = 1e-06
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Frame = +2
Query: 536 LASKGRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQ 688
L + G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA Q
Sbjct: 331 LVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQ 390
Query: 689 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRV 826
I + GG NV + Q+ G ++VGT RV
Sbjct: 391 IYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRV 436
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 49.6 bits (113), Expect = 3e-06
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Frame = +2
Query: 551 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 697
+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL QI K
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86
Query: 698 VVIALGDHLNAKCHACIGG-TNVREDIRQLESGVHVVVGTPXRVYDMI 838
+ AL + +GG V+++ + +VV TP R++ M+
Sbjct: 87 HINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMM 134
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 49.6 bits (113), Expect = 3e-06
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Frame = +2
Query: 551 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 697
+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL QI K
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253
Query: 698 VVIALGDHLNAKCHACIGG-TNVREDIRQLESGVHVVVGTPXRVYDMI 838
+ AL + +GG V+++ + +VV TP R++ M+
Sbjct: 254 HINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMM 301
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 48.4 bits (110), Expect = 7e-06
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Frame = +2
Query: 536 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 688
L +G D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL Q
Sbjct: 585 LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
Query: 689 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRV 826
I + GG V + Q+E G ++VGT R+
Sbjct: 645 IYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 48.4 bits (110), Expect = 7e-06
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Frame = +2
Query: 536 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 688
L +G D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL Q
Sbjct: 585 LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
Query: 689 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRV 826
I + GG V + Q+E G ++VGT R+
Sbjct: 645 IYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 48.4 bits (110), Expect = 7e-06
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Frame = +2
Query: 536 LASKGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 688
L +G D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL Q
Sbjct: 585 LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
Query: 689 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRV 826
I + GG V + Q+E G ++VGT R+
Sbjct: 645 IYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 47.6 bits (108), Expect = 1e-05
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 17/114 (14%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSI----SILQQ----IDTSI-----RECQ---ALILAPTREL 679
GRD+++ AQ+G+GKTA F + +ILQ + S+ R+ Q AL+L+PTREL
Sbjct: 203 GRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTREL 262
Query: 680 AQQIQKVVIALGDHLNAKCHACIGGT-NVREDIRQLESGVHVVVGTPXRVYDMI 838
+ QI GG N ++ I +L G H+++ TP R+ D++
Sbjct: 263 SLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVM 316
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQIQK 697
G DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 773 GNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFT 832
Query: 698 VVIALGDHLNAKCHACIGGTNVREDIRQLE--SGVHVVVGTPXRVYDMI 838
L KC GG + +++ L S ++++V T R+ D +
Sbjct: 833 TARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFV 881
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Frame = +2
Query: 548 GRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQIQK 697
G DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 773 GNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFT 832
Query: 698 VVIALGDHLNAKCHACIGGTNVREDIRQLE--SGVHVVVGTPXRVYDMI 838
L KC GG + +++ L S ++++V T R+ D +
Sbjct: 833 TARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFV 881
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 41.5 bits (93), Expect = 8e-04
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = +2
Query: 551 RDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELAQQIQKVVIALGDHLN 727
RDV A +G+GKT + + +L + + + QA+IL P + L QI D
Sbjct: 157 RDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQIVDEFKRWNDESG 216
Query: 728 -AKCHACIGGTNVREDIRQLESG-VHVVVGTPXRV 826
AK + G + ++ RQL S +V+V TP R+
Sbjct: 217 VAKVVSLSGANDFEKEARQLASDPPNVIVATPARL 251
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 37.1 bits (82), Expect = 0.016
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +2
Query: 650 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPXRVY 829
A+I+APT+EL QI K+ + L L + N E+ LE HVVV TP ++
Sbjct: 99 AVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLL 158
Query: 830 DMIPRR 847
M R
Sbjct: 159 RMCSLR 164
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 10/56 (17%)
Frame = +2
Query: 551 RDVIAQAQSGTGKTATFSISILQQI----------DTSIRECQALILAPTRELAQQ 688
R+V+A A +G+GKT F++ ++ +I ++ + A++L PTRELA Q
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 32.3 bits (70), Expect = 0.47
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 557 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 736
V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+ + + K
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 737 HA-CIGGTNVREDI 775
H + TN D+
Sbjct: 142 HEHALMDTNEYRDV 155
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 397 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 299
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +2
Query: 554 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 691
+VI A +G+GKTA +++L+ + + E +A+ + P ++A ++
Sbjct: 1339 NVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPMEDMATKV 1383
>Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical
protein T26E4.8 protein.
Length = 315
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 496 FEKPSAIQQRAIMPCIQGTRCYRSSPV 576
F + AI++ A+ PC G CYR +P+
Sbjct: 2 FFRRQAIRKCALRPCSGGEACYRDTPL 28
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 557 VIAQAQSGTGKTATFSISILQQIDTSIREC 646
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 367 DPSMAHFWNPLANLLTFFQTNKT 299
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,836,251
Number of Sequences: 27780
Number of extensions: 372538
Number of successful extensions: 1082
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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