Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_D18
         (913 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            31   0.048
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    28   0.45 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   2.4  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    24   5.6  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   9.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 31.1 bits (67), Expect = 0.048
 Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
 Frame = +1

Query: 454 PXPPXXXKXPPXXXXGGXPXGG--GGXPPXQKKXGXXGXPPPKKI 582
           P PP     PP    GG P GG  G  PP     G  G  PP  I
Sbjct: 585 PPPPPPMGPPPSPLAGG-PLGGPAGSRPPLPNLLGFGGAAPPVTI 628



 Score = 31.1 bits (67), Expect = 0.048
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -3

Query: 524 PPPPXGXPPXXXXGGXFXXXGGXGPP 447
           PPPP G PP    GG      G  PP
Sbjct: 587 PPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 27.1 bits (57), Expect = 0.79
 Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
 Frame = +3

Query: 453 APPXPXXEXPPXXXXGGXPXXG--GGXPPXP 539
           APP P    PP     G P  G  G  PP P
Sbjct: 584 APPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 27.1 bits (57), Expect = 0.79
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -1

Query: 523 PPPXXGXPPXXXXGGXSXXGXGGAPP 446
           PPP  G PP    GG      G  PP
Sbjct: 587 PPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 24.6 bits (51), Expect = 4.2
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = -1

Query: 523 PPPXXGXPPXXXXGGXSXXGXGGAPPP 443
           PPP    PP     G    G  G+ PP
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAGSRPP 612


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 27.9 bits (59), Expect = 0.45
 Identities = 18/58 (31%), Positives = 18/58 (31%)
 Frame = +1

Query: 433 KXXXGGGPXPPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPPPKKISXKRGFXG 606
           K   G  P  P   K PP       P G  G P      G  G P        RGF G
Sbjct: 701 KGQKGETPQLPPQRKGPPGPPGFNGPKGDKGLPGLAGPAGIPGAPGAPGEMGLRGFEG 758


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 21/72 (29%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
 Frame = +1

Query: 394 GXPXXXGKKXXXXKXXXGGGPXPPXXXKXPPXXXXGGXPXGGGGXPPXQK-KXGXXGXPP 570
           G P   G K         G   P      P      G P   G   P QK   G  G P 
Sbjct: 459 GMPGDKGDKGESGSVGMPGPQGPRGYPGQPGPEGLRGEPGQPGYGIPGQKGNAGMAGFPG 518

Query: 571 PKKISXKRGFXG 606
            K    +RGF G
Sbjct: 519 LKGQKGERGFKG 530



 Score = 24.2 bits (50), Expect = 5.6
 Identities = 15/54 (27%), Positives = 17/54 (31%)
 Frame = +1

Query: 448 GGPXPPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPPPKKISXKRGFXGK 609
           G P        P      G P GG G P      G  G   P+      GF G+
Sbjct: 383 GEPGRDGIPGQPGIAGPAGAPGGGEGRPGAPGPKGPRGYEGPQGPKGMDGFDGE 436


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 523 GXPPXQKKXGXXGXPPPK 576
           G P  Q+K    G PPPK
Sbjct: 133 GAPKPQRKLSDRGEPPPK 150


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +1

Query: 475  KXPPXXXXGGXPXGGGGXPP 534
            K PP    G     GGG PP
Sbjct: 1302 KQPPNDGGGAATAAGGGYPP 1321


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.314    0.147    0.479 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,058
Number of Sequences: 2352
Number of extensions: 7012
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98814789
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)