Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_D18
(913 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.030
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.030
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.030
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 34 0.16
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 34 0.16
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.16
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.16
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.16
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.37
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 0.86
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.5
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 1.5
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 3.5
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 4.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 4.6
AF045644-4|AAC02599.1| 211|Caenorhabditis elegans Onchocerca re... 29 4.6
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 6.1
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 6.1
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 6.1
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 28 8.1
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 28 8.1
U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 28 8.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.030
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = +1
Query: 451 GPXPPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPPPKKISXKRGFXG 606
G PP PP GG P GG PP G G PPP GF G
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG--GCPPPPPPPPPGGFKG 782
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -3
Query: 569 GGXPXXPXFFWXGGXPPPPXGXPPXXXXGGXFXXXGGXGPPP 444
GG P P GG PP G PP GG GG PPP
Sbjct: 724 GGPPPPPP---PGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 6/54 (11%)
Frame = -3
Query: 533 GGXPPPP------XGXPPXXXXGGXFXXXGGXGPPPXXXFXXXXFXPXXXGXPP 390
GG PPPP G PP GG GG PPP P G PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP----PPGGLPPISGGPPP 760
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 532 GGXPPPXXGXPPXXXXGGXSXXGXGGAPPP 443
GG PP G PP GG G PPP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = +1
Query: 460 PPXXXKXPPXXXXGGXPXGGGGXPPXQKKXG---XXGXPPP 573
PP PP GG P GG PP G G PPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 447 GGAPPXPXXEXPPXXXXGGXPXXGGGXPPXP 539
GG PP PP G P GG PP P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 569 GGXPXXPXFFWXGGXPPPPXGXPPXXXXGG 480
GG P P GG PPPP PP GG
Sbjct: 756 GGPPPPPPP--PGGCPPPPPPPPPGGFKGG 783
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 524 PPPPXGXPPXXXXGGXFXXXGGXGPPP 444
PPPP G PP GG PPP
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 523 PPPXXGXPPXXXXGGXSXXGXGGAPPPXXXXXXXFFXPXXGGXPXP 386
PPP G PP GG PPP F GG P P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF---KGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.030
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = +1
Query: 451 GPXPPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPPPKKISXKRGFXG 606
G PP PP GG P GG PP G G PPP GF G
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG--GCPPPPPPPPPGGFKG 782
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -3
Query: 569 GGXPXXPXFFWXGGXPPPPXGXPPXXXXGGXFXXXGGXGPPP 444
GG P P GG PP G PP GG GG PPP
Sbjct: 724 GGPPPPPP---PGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 6/54 (11%)
Frame = -3
Query: 533 GGXPPPP------XGXPPXXXXGGXFXXXGGXGPPPXXXFXXXXFXPXXXGXPP 390
GG PPPP G PP GG GG PPP P G PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP----PPGGLPPISGGPPP 760
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 532 GGXPPPXXGXPPXXXXGGXSXXGXGGAPPP 443
GG PP G PP GG G PPP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = +1
Query: 460 PPXXXKXPPXXXXGGXPXGGGGXPPXQKKXG---XXGXPPP 573
PP PP GG P GG PP G G PPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 447 GGAPPXPXXEXPPXXXXGGXPXXGGGXPPXP 539
GG PP PP G P GG PP P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 569 GGXPXXPXFFWXGGXPPPPXGXPPXXXXGG 480
GG P P GG PPPP PP GG
Sbjct: 756 GGPPPPPPP--PGGCPPPPPPPPPGGFKGG 783
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 524 PPPPXGXPPXXXXGGXFXXXGGXGPPP 444
PPPP G PP GG PPP
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 523 PPPXXGXPPXXXXGGXSXXGXGGAPPPXXXXXXXFFXPXXGGXPXP 386
PPP G PP GG PPP F GG P P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF---KGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.030
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = +1
Query: 451 GPXPPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPPPKKISXKRGFXG 606
G PP PP GG P GG PP G G PPP GF G
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG--GCPPPPPPPPPGGFKG 365
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -3
Query: 569 GGXPXXPXFFWXGGXPPPPXGXPPXXXXGGXFXXXGGXGPPP 444
GG P P GG PP G PP GG GG PPP
Sbjct: 307 GGPPPPPP---PGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 6/54 (11%)
Frame = -3
Query: 533 GGXPPPP------XGXPPXXXXGGXFXXXGGXGPPPXXXFXXXXFXPXXXGXPP 390
GG PPPP G PP GG GG PPP P G PP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP----PPGGLPPISGGPPP 343
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 532 GGXPPPXXGXPPXXXXGGXSXXGXGGAPPP 443
GG PP G PP GG G PPP
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = +1
Query: 460 PPXXXKXPPXXXXGGXPXGGGGXPPXQKKXG---XXGXPPP 573
PP PP GG P GG PP G G PPP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 447 GGAPPXPXXEXPPXXXXGGXPXXGGGXPPXP 539
GG PP PP G P GG PP P
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 569 GGXPXXPXFFWXGGXPPPPXGXPPXXXXGG 480
GG P P GG PPPP PP GG
Sbjct: 339 GGPPPPPPP--PGGCPPPPPPPPPGGFKGG 366
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 524 PPPPXGXPPXXXXGGXFXXXGGXGPPP 444
PPPP G PP GG PPP
Sbjct: 345 PPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 523 PPPXXGXPPXXXXGGXSXXGXGGAPPPXXXXXXXFFXPXXGGXPXP 386
PPP G PP GG PPP F GG P P
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF---KGGPPPP 370
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +1
Query: 445 GGGPXPPXXXKXPPXXXXGGXPXGGGGXP-PXQKKXGXXGXPPPKKIS 585
GGGP P PP GG G G P P + G PP K IS
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPRKSIS 662
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +1
Query: 445 GGGPXPPXXXKXPPXXXXGGXPXGGGGXP-PXQKKXGXXGXPPPKKIS 585
GGGP P PP GG G G P P + G PP K IS
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPRKSIS 662
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +1
Query: 448 GGPXPPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPPPK 576
G P PP PP P GG PP + PPP+
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 304
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = +1
Query: 391 GGXPXXXGKKXXXXKXXXGGGPXPPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPP 570
GG G++ G PP PP G P G G PP G PP
Sbjct: 209 GGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG--SPPP 266
Query: 571 PK 576
P+
Sbjct: 267 PR 268
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -1
Query: 532 GGXPPPXXGXPPXXXXGGXSXXGXGGAPPPXXXXXXXFFXPXXGGXP 392
G PPP G PP G GG+PPP P G P
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +3
Query: 372 KKKKXGXGXPPXXGXKXXXXKXXXGGGAPPXPXXEXPPXXXXGGXPXXGGGXPPXP 539
K++ G PP G PP P PP G P G PP P
Sbjct: 228 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Score = 31.9 bits (69), Expect = 0.65
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 533 GGXPPPPXGXPPXXXXGGXFXXXGGXGPPP 444
G PPPP G PP GG PPP
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +3
Query: 393 GXPPXXGXKXXXXKXXXGGGAPPXPXXEXPPXXXXGGXPXX-GGGXPPXPK 542
G PP G G+PP P PP G P GG PP P+
Sbjct: 245 GSPPLAGS--GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 293
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 447 GGAPPXPXXEXPPXXXXGGXPXXGGGXPPXP 539
G PP P PP G P G PP P
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = +1
Query: 445 GGGPXPPXXXKXPPXXXXGGXPXGGGGXPP---XQKKXGXXGXPPP 573
GG P PP PP G P G PP G PPP
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = +1
Query: 394 GXPXXXGKKXXXXKXXXGGGPXPPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPPP 573
G P G G P P PP P GG PP + G PPP
Sbjct: 245 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP--PRAGSPPPPPP 302
Query: 574 KKISXKRG 597
+ S G
Sbjct: 303 PRGSPPTG 310
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 845 PPXGGGXPPPPXXGKP 892
PP GG PPPP G P
Sbjct: 282 PPPAGGSPPPPRAGSP 297
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +3
Query: 450 GAPPXPXXEXPPXXXXGGXPXX--GGGXPPXP 539
G+PP P PP GG P G PP P
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +1
Query: 448 GGPXPPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPPPK 576
G P PP PP P GG PP + PPP+
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 325
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = +1
Query: 391 GGXPXXXGKKXXXXKXXXGGGPXPPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPP 570
GG G++ G PP PP G P G G PP G PP
Sbjct: 230 GGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG--SPPP 287
Query: 571 PK 576
P+
Sbjct: 288 PR 289
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -1
Query: 532 GGXPPPXXGXPPXXXXGGXSXXGXGGAPPPXXXXXXXFFXPXXGGXP 392
G PPP G PP G GG+PPP P G P
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +3
Query: 372 KKKKXGXGXPPXXGXKXXXXKXXXGGGAPPXPXXEXPPXXXXGGXPXXGGGXPPXP 539
K++ G PP G PP P PP G P G PP P
Sbjct: 249 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Score = 31.9 bits (69), Expect = 0.65
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 533 GGXPPPPXGXPPXXXXGGXFXXXGGXGPPP 444
G PPPP G PP GG PPP
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +3
Query: 393 GXPPXXGXKXXXXKXXXGGGAPPXPXXEXPPXXXXGGXPXX-GGGXPPXPK 542
G PP G G+PP P PP G P GG PP P+
Sbjct: 266 GSPPLAGS--GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 314
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 447 GGAPPXPXXEXPPXXXXGGXPXXGGGXPPXP 539
G PP P PP G P G PP P
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = +1
Query: 445 GGGPXPPXXXKXPPXXXXGGXPXGGGGXPP---XQKKXGXXGXPPP 573
GG P PP PP G P G PP G PPP
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = +1
Query: 394 GXPXXXGKKXXXXKXXXGGGPXPPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPPP 573
G P G G P P PP P GG PP + G PPP
Sbjct: 266 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP--PRAGSPPPPPP 323
Query: 574 KKISXKRG 597
+ S G
Sbjct: 324 PRGSPPTG 331
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 845 PPXGGGXPPPPXXGKP 892
PP GG PPPP G P
Sbjct: 303 PPPAGGSPPPPRAGSP 318
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +3
Query: 450 GAPPXPXXEXPPXXXXGGXPXX--GGGXPPXP 539
G+PP P PP GG P G PP P
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +1
Query: 448 GGPXPPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPPPK 576
G P PP PP P GG PP + PPP+
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 310
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = +1
Query: 391 GGXPXXXGKKXXXXKXXXGGGPXPPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPP 570
GG G++ G PP PP G P G G PP G PP
Sbjct: 215 GGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG--SPPP 272
Query: 571 PK 576
P+
Sbjct: 273 PR 274
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -1
Query: 532 GGXPPPXXGXPPXXXXGGXSXXGXGGAPPPXXXXXXXFFXPXXGGXP 392
G PPP G PP G GG+PPP P G P
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +3
Query: 372 KKKKXGXGXPPXXGXKXXXXKXXXGGGAPPXPXXEXPPXXXXGGXPXXGGGXPPXP 539
K++ G PP G PP P PP G P G PP P
Sbjct: 234 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Score = 31.9 bits (69), Expect = 0.65
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 533 GGXPPPPXGXPPXXXXGGXFXXXGGXGPPP 444
G PPPP G PP GG PPP
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +3
Query: 393 GXPPXXGXKXXXXKXXXGGGAPPXPXXEXPPXXXXGGXPXX-GGGXPPXPK 542
G PP G G+PP P PP G P GG PP P+
Sbjct: 251 GSPPLAGS--GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 299
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 447 GGAPPXPXXEXPPXXXXGGXPXXGGGXPPXP 539
G PP P PP G P G PP P
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = +1
Query: 445 GGGPXPPXXXKXPPXXXXGGXPXGGGGXPP---XQKKXGXXGXPPP 573
GG P PP PP G P G PP G PPP
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = +1
Query: 394 GXPXXXGKKXXXXKXXXGGGPXPPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPPP 573
G P G G P P PP P GG PP + G PPP
Sbjct: 251 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP--PRAGSPPPPPP 308
Query: 574 KKISXKRG 597
+ S G
Sbjct: 309 PRGSPPTG 316
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 845 PPXGGGXPPPPXXGKP 892
PP GG PPPP G P
Sbjct: 288 PPPAGGSPPPPRAGSP 303
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +3
Query: 450 GAPPXPXXEXPPXXXXGGXPXX--GGGXPPXP 539
G+PP P PP GG P G PP P
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -1
Query: 532 GGXPPPXXGXPPXXXXGGXSXXGXGGAPPPXXXXXXXFFXPXXGGXP 392
GG P G PP S GG PPP F P G P
Sbjct: 341 GGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPP 387
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = -1
Query: 538 GXGGXPPPXXGXPPXXXXGGXSXXGXGGAPPPXXXXXXXFFXPXXGGXP 392
G GG PP G P G G GG PP + P G P
Sbjct: 405 GPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPP 453
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +1
Query: 451 GPXPPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPPPKKISXKRGFXGKXXG 618
G PP PP G P GG P Q++ G PPP+ + ++GF G
Sbjct: 286 GFAPPQQFGGPPP---SGPPSEYGGYAPPQQQQQQFGAPPPQG-APQQGFGAPPQG 337
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.5 bits (68), Expect = 0.86
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 818 GXXXKXXXXPPXGGGXPPPPXXGKPQ 895
G + PP G G PPPP G+PQ
Sbjct: 58 GNASRRPPPPPKGTGTPPPPPTGEPQ 83
Score = 31.5 bits (68), Expect = 0.86
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 818 GXXXKXXXXPPXGGGXPPPPXXGKPQ 895
G + PP G G PPPP G+PQ
Sbjct: 90 GNASRRPPPPPKGTGTPPPPPTGEPQ 115
Score = 31.5 bits (68), Expect = 0.86
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 818 GXXXKXXXXPPXGGGXPPPPXXGKPQ 895
G + PP G G PPPP G+PQ
Sbjct: 121 GNASRRPPPPPKGTGSPPPPPTGEPQ 146
Score = 31.5 bits (68), Expect = 0.86
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 818 GXXXKXXXXPPXGGGXPPPPXXGKPQ 895
G + PP G G PPPP G+PQ
Sbjct: 152 GNASRRPPPPPKGTGSPPPPPTGEPQ 177
Score = 31.5 bits (68), Expect = 0.86
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 818 GXXXKXXXXPPXGGGXPPPPXXGKPQ 895
G + PP G G PPPP G+PQ
Sbjct: 183 GNASRRPPPPPKGTGTPPPPPTGEPQ 208
Score = 31.5 bits (68), Expect = 0.86
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 818 GXXXKXXXXPPXGGGXPPPPXXGKPQ 895
G + PP G G PPPP G+PQ
Sbjct: 245 GNASRRPPPPPKGTGSPPPPPTGEPQ 270
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 845 PPXGGGXPPPPXXGKPQ 895
PP G G PPPP G+PQ
Sbjct: 36 PPKGTGTPPPPPTGEPQ 52
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 818 GXXXKXXXXPPXGGGXPPPPXXGKPQ 895
G + PP G G P PP G+PQ
Sbjct: 214 GYASRRPPPPPKGTGSPTPPPTGEPQ 239
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +1
Query: 448 GGPX-PPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPPP 573
GGP PP PP GG GGG PP G PPP
Sbjct: 785 GGPGAPPPPGMRPPPGAPGG---GGGMYPPLIPTRPGPGGPPP 824
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 399 PPXXGXKXXXXKXXXGGGAPPXPXXEXPPXXXXGGXPXXGGGXPP 533
P G + G GAPP P PP GG GG PP
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGG----GGMYPP 811
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +1
Query: 448 GGPX-PPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPPP 573
GGP PP PP GG GGG PP G PPP
Sbjct: 785 GGPGAPPPPGMRPPPGAPGG---GGGMYPPLIPTRPGPGGPPP 824
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 399 PPXXGXKXXXXKXXXGGGAPPXPXXEXPPXXXXGGXPXXGGGXPP 533
P G + G GAPP P PP GG GG PP
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGG----GGMYPP 811
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = +1
Query: 433 KXXXGGGPXPPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPPPKKISXKRGFXGK 609
K GG P PP P G P GGG P G G S + G G+
Sbjct: 150 KPCPGGRPGPPGPPGRPGSDGQPGRPATGGGAAPRPGPPGPKGPRGAPGNSGRAGAPGQ 208
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +1
Query: 445 GGGPX-PPXXXKXPPXXXXGGXP--XGGGGXPPXQKKXGXXGXPPP 573
GG P PP PP G P GG G PP G G PPP
Sbjct: 161 GGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGH---GGMGGPPP 203
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +1
Query: 445 GGGPX-PPXXXKXPPXXXXGGXP--XGGGGXPPXQKKXGXXGXPPP 573
GG P PP PP G P GG G PP G G PPP
Sbjct: 441 GGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGH---GGMGGPPP 483
>AF045644-4|AAC02599.1| 211|Caenorhabditis elegans Onchocerca
related antigen familyprotein 1 protein.
Length = 211
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 551 PXFFWXGGXPPPPXGXPP 498
P F GG PPPP G PP
Sbjct: 23 PCFGRCGGRPPPPCGLPP 40
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 399 PPXXGXKXXXXKXXXGGGAPPXPXXEXPPXXXXGGXPXXGGGXPP 533
P G + G GAPP P PP GG GG PP
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGG----GGMYPP 811
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 399 PPXXGXKXXXXKXXXGGGAPPXPXXEXPPXXXXGGXPXXGGGXPP 533
P G + G GAPP P PP GG GG PP
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGG----GGMYPP 811
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +3
Query: 444 GGGAPPXPXXEXPPXXXXGGXPXXGGGXPPXP 539
G GAPP P PP P GGG PP P
Sbjct: 30 GCGAPPPPPACAPPPA-----PACGGGAPPPP 56
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 28.3 bits (60), Expect = 8.1
Identities = 23/83 (27%), Positives = 28/83 (33%), Gaps = 2/83 (2%)
Frame = +1
Query: 394 GXPXXXGKKXXXXKXXXGGGPXPPXXXKXPPXXXX-GGXPX-GGGGXPPXQKKXGXXGXP 567
G P G + G G P + PP G P GGGG P Q G G P
Sbjct: 243 GHPGDAGAPGAPGQVVAGPGSVGPPGPQGPPGLAGPDGQPGHGGGGQPGPQGPPGDDGHP 302
Query: 568 PPKKISXKRGFXGKXXGXXANXA 636
+ G G+ G + A
Sbjct: 303 GEDGGAGGPGQPGQDGGSGGSGA 325
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical
protein K07F5.11 protein.
Length = 290
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = -1
Query: 508 GXPPXXXXGGXSXXGXGGAPPPXXXXXXXFFXPXXGGXPXPXFFFFXGG 362
G P GG S G GAPPP GG +F GG
Sbjct: 24 GGGPAGGGGGASKVGGAGAPPPGTSVYMGAGAGGGGGGGAQSAYFAVGG 72
>U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein
173 protein.
Length = 325
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/72 (25%), Positives = 22/72 (30%)
Frame = +1
Query: 394 GXPXXXGKKXXXXKXXXGGGPXPPXXXKXPPXXXXGGXPXGGGGXPPXQKKXGXXGXPPP 573
G P G GG P K PP P G G + + G G P P
Sbjct: 220 GPPGPRGPPGETGDEGEGGPDGIPMEKKSPPGPRGPPGPAGPDGPQGPEGRSGKQGPPGP 279
Query: 574 KKISXKRGFXGK 609
+ G G+
Sbjct: 280 TGQEGEEGVIGE 291
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.147 0.479
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,088,698
Number of Sequences: 27780
Number of extensions: 248450
Number of successful extensions: 1305
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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