Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_D15
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0468 + 14376926-14377183,14377534-14377710,14377802-143778...    33   0.31 
01_05_0699 - 24376987-24377154,24377259-24377406,24377530-243776...    32   0.54 
07_03_1489 + 26933029-26933077,26933704-26933838,26934354-269344...    31   1.2  
06_01_0639 + 4641665-4642846,4642929-4643360                           29   3.8  
10_06_0102 + 10758601-10758948,10759051-10759257,10759349-107595...    28   8.7  
04_03_0500 + 16585157-16585201,16586840-16586978,16587456-165875...    28   8.7  
01_07_0111 - 41137822-41138973,41139453-41139540,41139850-411399...    28   8.7  
01_01_1234 - 10007446-10007940,10008030-10008125,10008980-100092...    28   8.7  

>05_03_0468 +
           14376926-14377183,14377534-14377710,14377802-14377867,
           14378009-14378134,14378499-14378678,14379015-14379179,
           14380185-14380538
          Length = 441

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 36/117 (30%), Positives = 48/117 (41%), Gaps = 4/117 (3%)
 Frame = +2

Query: 284 IRGLKT-SVVCGTAKSSPAQPGYPSEDKILQIKHHRNDYAEQYPSVTLILNKTMTEESRL 460
           +R LKT       AK   AQ     E+KIL+  H + D  E    + L L   + E++RL
Sbjct: 282 LRELKTVKADLAFAKERCAQ--LEDENKILRESHDKGDNPEDDDLIRLQLETLLAEKARL 339

Query: 461 ALEK---WKQERISEMGVEEFNRFYQAQMAVGTKFHNTLKDYFTQPR*PASYREGSG 622
           A E     ++ R     VE      Q  + V        + Y TQ   PA  R GSG
Sbjct: 340 AHENSVYARENRFLREIVEYHQLTMQDVIYVDEGIEEVTEVYPTQVLPPAPSRAGSG 396


>01_05_0699 -
           24376987-24377154,24377259-24377406,24377530-24377645,
           24377743-24377925,24377998-24378186,24378273-24378497,
           24378514-24378759,24378836-24378983,24379126-24379241,
           24379441-24379497,24379735-24379923,24380001-24380150,
           24380323-24380404,24380484-24380601,24380713-24380899,
           24381044-24381138,24381223-24381277,24381376-24381567,
           24381657-24381853,24382534-24382684
          Length = 1003

 Score = 32.3 bits (70), Expect = 0.54
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 447 KSLGWLWRSGNKSGFPKWELKNLIDFTKLKWQL 545
           K L   +  GN+ GFP W L+N I F  L+W++
Sbjct: 230 KLLFGFYDHGNR-GFPGWALRNYIAFVSLRWKI 261


>07_03_1489 +
           26933029-26933077,26933704-26933838,26934354-26934478,
           26934558-26934626,26934730-26934798,26935095-26935157,
           26935280-26936533
          Length = 587

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
 Frame = +2

Query: 275 NTAIRGLKTSVVCGTAKSSPAQPGYPSEDKILQIKHHRNDYA-EQYPSVTLILNKTMTEE 451
           NTA    K  V   +  +  AQ     EDK +++K + ND   +++  +  I  K   E 
Sbjct: 57  NTAGSACKKRVKASSLDNVKAQCHMILEDKRIELKEYLNDLCHDKHKVIDNICKKYELEN 116

Query: 452 SRLA-LEKWKQERISEMGVEEFNRFYQAQMAVGTKFHNTLKDYFTQP 589
             +   +K K E++S     + N+  +   + G K  NT++ + T P
Sbjct: 117 IEITNAKKQKAEKLSREMKNKCNK--KMPKSQGAKVLNTMRFFHTTP 161


>06_01_0639 + 4641665-4642846,4642929-4643360
          Length = 537

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 17/64 (26%), Positives = 29/64 (45%)
 Frame = +2

Query: 425 ILNKTMTEESRLALEKWKQERISEMGVEEFNRFYQAQMAVGTKFHNTLKDYFTQPR*PAS 604
           ++ KTM E +R  ++ W+    +    E        Q+ VG +FH    D  +     +S
Sbjct: 175 MMAKTMAECARKVIQAWEARAAAAADGERM-----VQVEVGEQFHELTADVISHTAFGSS 229

Query: 605 YREG 616
           YR+G
Sbjct: 230 YRQG 233


>10_06_0102 + 10758601-10758948,10759051-10759257,10759349-10759507,
            10759617-10759709,10759913-10760008,10760457-10760724,
            10760805-10761047,10761298-10761422,10761499-10761615,
            10761705-10761779,10761886-10761942,10762035-10762139,
            10762244-10762330,10762790-10763047,10763075-10763263,
            10763418-10763528,10763640-10763729,10763814-10763990,
            10764075-10764152,10764412-10764726,10764819-10765162,
            10765304-10765541,10765631-10765998,10766106-10766316,
            10766622-10766801,10766886-10769045,10769151-10769207
          Length = 2251

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 696  VQHSILWLLEKIYFSTHLLQTPIHPPLPSLYE 601
            ++HS  W ++KIY+    +   + PPL +  E
Sbjct: 1228 MRHSFQWSVDKIYYEEDPMLRHVEPPLSTFLE 1259


>04_03_0500 +
           16585157-16585201,16586840-16586978,16587456-16587577,
           16588850-16588900,16589289-16589601,16592816-16593162
          Length = 338

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 751 CLRNQQWHQKFPY 713
           C RN+ WHQ+ PY
Sbjct: 63  CARNRSWHQRLPY 75


>01_07_0111 -
           41137822-41138973,41139453-41139540,41139850-41139969,
           41140165-41140211,41140796-41141029,41141305-41141505,
           41141506-41143407,41144140-41145303,41145574-41145879
          Length = 1737

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = -3

Query: 569 LKCCETWYQLPFELGKIY*ILQLPFRKSALVSTSPKPT*TLQSLFYLILVSPMGIVQ 399
           L  C    QLP +LG +Y +  L       V   PK    L+ L YL L    G++Q
Sbjct: 762 LSDCHELEQLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQ 818


>01_01_1234 -
           10007446-10007940,10008030-10008125,10008980-10009253,
           10009381-10009682,10010078-10010123,10010319-10010368,
           10011124-10011268,10012051-10012229,10012327-10012485,
           10012636-10012887,10012972-10013097,10013197-10013525,
           10014183-10014252
          Length = 840

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 272 NNTAIRGLKTSVVCGTAKS-SPAQPGYPSEDKILQIKHHRNDYAEQY 409
           N    +   TS  C T  S S  QPGYPS+ + L ++   + +  Q+
Sbjct: 510 NGGGTQSFDTSEHCSTVPSDSDEQPGYPSQFEPLHMEQTNDMFLSQF 556


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,058,052
Number of Sequences: 37544
Number of extensions: 481484
Number of successful extensions: 1295
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)