Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_D15
         (895 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81042-3|CAB02794.2|  660|Caenorhabditis elegans Hypothetical pr...    33   0.36 
Z75711-6|CAB00037.3|  387|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z82265-6|CAB05170.2|  537|Caenorhabditis elegans Hypothetical pr...    29   5.9  

>Z81042-3|CAB02794.2|  660|Caenorhabditis elegans Hypothetical
           protein C27H6.3 protein.
          Length = 660

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +2

Query: 461 ALEKWKQERISEMGVEEFNRFYQAQMAVGTKFHNTLKD 574
           AL  W++ +I EMG+  F      +M++GTK H  +++
Sbjct: 444 ALYLWQKAKIDEMGLSAFKSSMTERMSLGTKTHTKVEE 481



 Score = 32.7 bits (71), Expect = 0.36
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 700 PVLKYRGIFDAIADYEDKPTLIEWKKSDKPRKSIAPDLRQPGCSW 834
           P L Y+G FDA+  Y+D   +++WK +  P +S     R+   S+
Sbjct: 533 PTLAYQGRFDAVVKYKDYWNILDWKTT--PARSSFSTQREDSLSY 575


>Z75711-6|CAB00037.3|  387|Caenorhabditis elegans Hypothetical
           protein K02B12.8 protein.
          Length = 387

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 9/30 (30%), Positives = 21/30 (70%)
 Frame = +2

Query: 431 NKTMTEESRLALEKWKQERISEMGVEEFNR 520
           N+T+ +++ ++LE W+Q R +  GV + ++
Sbjct: 287 NQTIMDKTSMSLENWRQNRANSFGVHDISK 316


>Z82265-6|CAB05170.2|  537|Caenorhabditis elegans Hypothetical
           protein F02H6.1 protein.
          Length = 537

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +2

Query: 449 ESRLALEKWKQERISEMGVEEFNRFYQAQ 535
           +S+ A E+ +++R+ E+G   FNRF Q Q
Sbjct: 242 DSQFAQEEQRRDRLREIGQRIFNRFEQQQ 270


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,316,219
Number of Sequences: 27780
Number of extensions: 449229
Number of successful extensions: 1244
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)