Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_D15
         (895 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     24   2.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   2.8  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   6.6  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +3

Query: 540 QLVPSFTTL*RITSLNLXSQLRIEKEVEGVWVSVAD--VLKSISSPKAIESNVVHPGT 707
           + VPS+     I   +   Q R+    + V ++  D  +++ ISSP A+E  ++ P T
Sbjct: 315 KFVPSYPFEEDINEGSNYMQTRVPAWCDRVLLNPTDKMLVQDISSPDAVEYGIIGPTT 372


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -2

Query: 318 VPHTTDVFKPRIAVLFKRTPKRFKQC-LVFCHIL 220
           VP+T   F PR AV     P   + C LV  H L
Sbjct: 145 VPYTVKNFHPRCAVNNYNDPSNVRNCELVGLHDL 178


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -1

Query: 211 SLNHCTVCKRSNHSIINDKFHRIFFSRSVVLLRSIF 104
           ++ + T C+    +I  DK  R FF  S ++L  ++
Sbjct: 343 TVQYDTCCQGRATAIYIDKVSRFFFPFSFLILNVVY 378


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,971
Number of Sequences: 438
Number of extensions: 5111
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)