Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_D10
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1046 + 25662715-25662884,25663163-25663757                       30   2.9  
07_01_0176 - 1244704-1245102                                           30   2.9  
11_05_0063 - 18756289-18756390,18756769-18756954,18757053-187572...    29   6.8  
04_04_0340 + 24517562-24520318                                         28   9.0  

>12_02_1046 + 25662715-25662884,25663163-25663757
          Length = 254

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 167 KESEPFKSVVPDNKPFGYPFDRPXSSSVLQTT*H 268
           +E  PF  + P  +P  +P DRP  S  +++T H
Sbjct: 213 REVHPFPLLSPQGQPVSFPPDRPAHSVTVRSTHH 246


>07_01_0176 - 1244704-1245102
          Length = 132

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +1

Query: 757 GGGGGXFFXXXXIXHPPGKXGFXXWG 834
           GGGGG FF       PPG  G+  WG
Sbjct: 42  GGGGGGFFEVPWFG-PPGGGGWGAWG 66


>11_05_0063 -
           18756289-18756390,18756769-18756954,18757053-18757223,
           18757339-18757383,18758087-18758260,18758801-18758887,
           18759349-18759510,18759945-18760015,18760296-18760435,
           18760828-18760952,18761329-18761463,18762069-18762314,
           18762530-18762755,18763039-18763091
          Length = 640

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 134 FVFVYPYEPTPKESEPFKSVVPDNKPFGYPFDR 232
           F   +PYEPTP +++ F  V  D      P DR
Sbjct: 79  FTAEFPYEPTPDQNQAFIDVDKDLTERETPMDR 111


>04_04_0340 + 24517562-24520318
          Length = 918

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 16/87 (18%), Positives = 44/87 (50%)
 Frame = +1

Query: 205 QTIRLSIRSPRFFLSTSNNLTCSSRRSWSTMKENYSPIYLTFLTIHQIKRNYNALIRKSK 384
           ++I+  ++  +  L+T  +   +  RSW  +++ +SP+     TI+ +     A   KS+
Sbjct: 156 ESIKSGMQCIKNVLATIRSRKEADNRSWCIVEQVFSPLLKLLKTINHLVSEAAARNNKSE 215

Query: 385 RTLTITVYNSRISCEYVKTVTNVINKN 465
               +   ++ ++C  ++   ++I++N
Sbjct: 216 NYKILVKIDAEVNC--LQDALDLIDRN 240


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,697,142
Number of Sequences: 37544
Number of extensions: 279115
Number of successful extensions: 454
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)