Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_D10
         (912 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41017-1|AAC48211.1|  343|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U41026-1|AAM51522.2|  101|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z68882-17|CAI79150.1|  111|Caenorhabditis elegans Hypothetical p...    28   8.1  

>U41017-1|AAC48211.1|  343|Caenorhabditis elegans Hypothetical
           protein T26C11.2 protein.
          Length = 343

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +2

Query: 155 EPTPK-ESEPFKSVVPDNKPFGYPFDRP 235
           +PTPK +SEPF   +P +KP   PF  P
Sbjct: 7   KPTPKPKSEPFPKPMPKSKPKSEPFPSP 34


>U41026-1|AAM51522.2|  101|Caenorhabditis elegans Hypothetical
           protein C28G1.5 protein.
          Length = 101

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 346 IKRNYNALIRKSKRTLTITVYNSRISCEYVKTVTNVINKN 465
           I RN         + +T  V NS + C + +TVTN++N +
Sbjct: 21  IPRNLTCGHALCHKCITAMVNNSTVECPFCRTVTNIVNND 60


>Z68882-17|CAI79150.1|  111|Caenorhabditis elegans Hypothetical
           protein C47E12.14 protein.
          Length = 111

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +1

Query: 376 KSKRTLTITVYNSRISCEYVKTVTNVINK 462
           KSK TL   ++ +R+S ++VKT  NV +K
Sbjct: 58  KSKFTLAQPIFKNRMSADFVKTHKNVGSK 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,782,965
Number of Sequences: 27780
Number of extensions: 240240
Number of successful extensions: 568
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)