Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_D09
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   3.9  
03_05_1104 + 30431833-30432143,30432789-30432862,30432949-304330...    29   5.2  

>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +1

Query: 805  PP*XPPXXPXLFPNPCXLTXXPXPPFSP 888
            P   PP  P L P+P   T  P PP SP
Sbjct: 1150 PSDSPPCQPPLPPSPPPATPPPPPPLSP 1177


>03_05_1104 +
           30431833-30432143,30432789-30432862,30432949-30433067,
           30434462-30434526,30434962-30435310
          Length = 305

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
 Frame = +1

Query: 817 PPXXPXLFPNPCXLTXXPXP----PFSPLGKAVG 906
           PP  P   P PC  +  P P    PF+P  +AVG
Sbjct: 41  PPPPPVRLPRPCASSHDPVPPPTQPFAPALEAVG 74


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,023,760
Number of Sequences: 37544
Number of extensions: 204095
Number of successful extensions: 385
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)