Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_D07
         (899 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0257 + 11145558-11145876,11148181-11148347,11149114-111493...    29   3.8  
04_04_1105 - 30942735-30942791,30943116-30943466,30943670-309437...    29   3.8  
03_05_0228 - 22137771-22138016,22138109-22138306,22138852-221390...    29   3.8  
12_02_0082 - 13372997-13373863,13373928-13374386                       29   6.7  
09_04_0741 - 19852339-19852497,19853185-19853246,19853352-198534...    29   6.7  
09_01_0003 - 95371-95433,95485-95715,95809-95862,96730-96972,985...    29   6.7  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   6.7  

>05_03_0257 +
           11145558-11145876,11148181-11148347,11149114-11149311,
           11149405-11149650
          Length = 309

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +1

Query: 325 MNRPTRGE--RRFAYWALFRFLVSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTC 498
           + RPTR +  RR  Y A   ++V   R  R    G +  + +   YG P++QGITQ +  
Sbjct: 144 LTRPTRPDKARRLGYKAKQGYVVYRVRVRRG---GRKRPVPKGIVYGKPKHQGITQLKFQ 200

Query: 499 EQKAS 513
             K S
Sbjct: 201 RNKRS 205


>04_04_1105 -
           30942735-30942791,30943116-30943466,30943670-30943762,
           30943869-30944072,30944155-30944399,30945019-30945877,
           30946070-30946936,30947113-30947562
          Length = 1041

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
 Frame = +2

Query: 698 RLPDTCPPFSLREAWRFLIA-----HAVGISVRCRSVRS 799
           RL D C P  L+E WRFL+A      A   S RC++ R+
Sbjct: 849 RLAD-CDPRVLKEQWRFLVAFWNTEEAQAASARCKASRA 886


>03_05_0228 -
           22137771-22138016,22138109-22138306,22138852-22139018,
           22139129-22139132
          Length = 204

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +1

Query: 325 MNRPTRGE--RRFAYWALFRFLVSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTC 498
           + RPTR +  RR  Y A   ++V   R  R    G +  + +   YG P++QGITQ +  
Sbjct: 39  LTRPTRPDKARRLGYKAKQGYVVYRVRVRRG---GRKRPVPKGIVYGKPKHQGITQLKFQ 95

Query: 499 EQKAS 513
             K S
Sbjct: 96  RNKRS 100


>12_02_0082 - 13372997-13373863,13373928-13374386
          Length = 441

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = +1

Query: 670 SCALLFRPXPLTGYXSAFLPS 732
           SCALLF P PL G     LPS
Sbjct: 164 SCALLFSPMPLDGPTLGLLPS 184


>09_04_0741 -
           19852339-19852497,19853185-19853246,19853352-19853415,
           19853561-19853614,19853744-19853890,19854460-19854564,
           19854651-19854794,19854987-19855093,19855613-19855712,
           19855804-19855833,19856492-19856608,19856705-19856828,
           19857143-19857189,19857272-19857400,19857777-19857852,
           19858446-19858543,19858630-19858671,19858811-19859044
          Length = 612

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 671 RALSCSDPCRLPDTCPPFSLREAWRFLIAHA 763
           R L+C   C  P  CPP+S    W+ ++  A
Sbjct: 466 RELNCKSICHSP-MCPPYSAMTEWQHMVLSA 495


>09_01_0003 -
           95371-95433,95485-95715,95809-95862,96730-96972,
           98544-99317
          Length = 454

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = +1

Query: 499 EQKASKRPGTVKRPRCWRFSIGLRPPDEHHKNRRSSQSVAKPDRTIKIPXRFPLXAPSCA 678
           ++K  K+P    +       + L PPD   K +++S+ V  P+R  K     P   PS  
Sbjct: 17  KKKKKKKPLKPSQEEEEALPLPLPPPDR--KRKKASEPVNSPERAKKKKTATPHEPPSAK 74

Query: 679 LLFRPXP 699
              RP P
Sbjct: 75  QQKRPLP 81


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
 Frame = -3

Query: 450  PPLSELIPLAAAERPXXXXXXXXXXXER-PIRKPPLPARWPIH*CRKNLPHLXPEPET*N 274
            PPLS  +P      P              PI+ PP+P   P+     +L +  P PE   
Sbjct: 1173 PPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPP-PVPSSPSSLGYQPPAPE--- 1228

Query: 273  EXXXXXXXCLLQRYIWLQNKAIASQISQ 190
                      +Q+Y WL NK I  Q +Q
Sbjct: 1229 ----YFRASNIQKYSWLNNKLILMQSNQ 1252


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,904,339
Number of Sequences: 37544
Number of extensions: 442884
Number of successful extensions: 1097
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)