BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_D07
(899 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 26 1.4
AY146716-1|AAO12076.1| 159|Anopheles gambiae odorant-binding pr... 25 4.1
AJ441131-3|CAD29632.1| 568|Anopheles gambiae putative apyrase/n... 23 9.6
AJ439398-2|CAD28125.1| 568|Anopheles gambiae putative 5' nucleo... 23 9.6
AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant r... 23 9.6
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 26.2 bits (55), Expect = 1.4
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 617 RNPTGL*RYQXVSPXKLPRALSCSDPCRLPDTCPPFSLREAWRFLI 754
R+P R + P PR+ S P RLP PF W ++
Sbjct: 272 RSPPARRRSRSTRPTSWPRSRPTSKPKRLPRRRRPFFFSSWWCIIL 317
>AY146716-1|AAO12076.1| 159|Anopheles gambiae odorant-binding
protein AgamOBP12 protein.
Length = 159
Score = 24.6 bits (51), Expect = 4.1
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 486 LRYPLILWITVLPPLSELIP 427
+RY +LW+ +L +S L+P
Sbjct: 4 VRYHFVLWLLILIGVSSLVP 23
>AJ441131-3|CAD29632.1| 568|Anopheles gambiae putative
apyrase/nucleotidase protein.
Length = 568
Score = 23.4 bits (48), Expect = 9.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 727 PSGSVALSHSSRCRYLS 777
P+GS +S S RCRY S
Sbjct: 481 PAGSRVVSVSLRCRYCS 497
>AJ439398-2|CAD28125.1| 568|Anopheles gambiae putative 5'
nucleotidase protein.
Length = 568
Score = 23.4 bits (48), Expect = 9.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 727 PSGSVALSHSSRCRYLS 777
P+GS +S S RCRY S
Sbjct: 481 PAGSRVVSVSLRCRYCS 497
>AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant
receptor Or4 protein.
Length = 397
Score = 23.4 bits (48), Expect = 9.6
Identities = 10/48 (20%), Positives = 20/48 (41%)
Frame = -3
Query: 237 RYIWLQNKAIASQISQNKALFFTALLDCGVVQTLSHVSLSCLESQLTL 94
++ WL+N+ + ++ CG V L +++ C TL
Sbjct: 173 KFYWLENRTSVEDYITFVLIMLPVVVMCGYVCNLKVMTICCSIGHCTL 220
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 812,246
Number of Sequences: 2352
Number of extensions: 15381
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -