Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_D07
         (899 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    27   0.31 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   1.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   8.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   8.8  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 21  NTYRESLRFKLLKKVPAARGSPFIRGLIETPD 116
           N  R  L   L+  + AA GSP + GL  TPD
Sbjct: 299 NNRRVWLTILLVWAISAAIGSPIVLGLNNTPD 330


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 431  YRSPQPNDRAQRVSETRKRKSAQYANRLSPRVG 333
            Y  PQP +  Q  ++ + +  +Q AN+  P  G
Sbjct: 997  YTPPQPANAQQGQAQAQAKPQSQEANKPKPATG 1029


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 734 PEGRKADXYPVSGXGRNRRAHEG 666
           P G     Y +SG G+   A+EG
Sbjct: 28  PLGAIKGYYKISGNGKQYEAYEG 50


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 734 PEGRKADXYPVSGXGRNRRAHEG 666
           P G     Y +SG G+   A+EG
Sbjct: 28  PLGAIKGYYKISGNGKQYEAYEG 50


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,006
Number of Sequences: 438
Number of extensions: 4863
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)