Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_D06
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0158 + 10911997-10912078,10912203-10912288,10913780-109138...    38   0.008
10_01_0275 - 2904601-2904900,2905083-2905233,2905522-2905598,290...    30   2.9  

>11_03_0158 +
           10911997-10912078,10912203-10912288,10913780-10913857,
           10913967-10914098,10914385-10914435,10914529-10914669,
           10914754-10914876,10914989-10915066,10915448-10915541,
           10915633-10915739,10915936-10916019,10916649-10916744,
           10916835-10917023,10917705-10917780,10918507-10918610,
           10918708-10918967,10920000-10920086,10920184-10920411,
           10920752-10920826,10921264-10921346,10921552-10921661
          Length = 787

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
 Frame = +1

Query: 388 GTRNPPFLVCVVPLNAQLDVGSALVILKTCSDGAVVNESENGIVHIGLPNFKQRFSFICP 567
           G+ + P +V +  L++  +V S    L T + G   +E +     +  P +K R + +  
Sbjct: 74  GSSSAPRVVVLFGLSSSANVRSLAKDLLTIASG---DEEKPTSSTVASPTYKLRTTVLEA 130

Query: 568 EVGDDFALLDVLKIADTALYVSSA-------LEEPVDEWGEKVLALSMAQGMPT 708
             GD  + +++ K+AD   +V SA          P+D++G + L++  A G+P+
Sbjct: 131 PYGDLTSCMELAKVADLLAFVLSANSLYDCDSSSPIDDFGSQCLSVFRAMGLPS 184


>10_01_0275 -
           2904601-2904900,2905083-2905233,2905522-2905598,
           2907201-2907390,2908796-2908981,2910521-2910571,
           2911476-2911885,2912252-2912509,2912768-2913070
          Length = 641

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +1

Query: 430 NAQLDVGSALVILKTCSDGAVVNESENGIVHI--GLPNFKQRFSFICPEVGDDFALLDV 600
           NA L  G    +LK+         S+  I HI  G  N ++     CP++GD+ ALL V
Sbjct: 418 NAFLGFGRCCFLLKSVCLANCCKISDEAISHIAQGCKNLRELSIISCPQIGDE-ALLSV 475


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,414,682
Number of Sequences: 37544
Number of extensions: 450737
Number of successful extensions: 1181
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)