Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_D06
         (915 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40029-12|AAA81131.1|  785|Caenorhabditis elegans Temporarily as...    56   5e-08
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    30   2.0  
U41271-3|AAP31439.1|  577|Caenorhabditis elegans Hypothetical pr...    29   6.1  
U41271-2|AAA82444.3|  713|Caenorhabditis elegans Hypothetical pr...    29   6.1  
U23179-11|AAN63447.1|  293|Caenorhabditis elegans Hypothetical p...    29   6.1  
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.        28   8.1  
AC025726-18|AAK73910.1|  996|Caenorhabditis elegans Hypothetical...    28   8.1  
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical...    28   8.1  

>U40029-12|AAA81131.1|  785|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 151 protein.
          Length = 785

 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 31/106 (29%), Positives = 51/106 (48%)
 Frame = +1

Query: 391 TRNPPFLVCVVPLNAQLDVGSALVILKTCSDGAVVNESENGIVHIGLPNFKQRFSFICPE 570
           T N P LV VV L         +  L TC D  ++  +    +   +P FK R SF+ P+
Sbjct: 80  TSNAPCLVTVVSLGVGARPTEFIKKLATC-DETIIQTTSPSTIDFAIPRFKSRVSFLTPD 138

Query: 571 VGDDFALLDVLKIADTALYVSSALEEPVDEWGEKVLALSMAQGMPT 708
             +   +LD ++ +D   ++     E + EW E++L +  A G+PT
Sbjct: 139 KDNVDGVLDAIRASDVLCFLWPMSAE-LSEWDEQLLTIIKANGLPT 183


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
 Frame = -2

Query: 686  ESAKTFSPHSSTGSSKAELT*RAVSAIFKTSRSAKSSPT-SGQINENRCLKFGNPMCTIP 510
            +S  +  P  S+ +S A +T  +  +   +     S+P  S  +   +   F +P  T  
Sbjct: 923  QSPTSAQPAQSSSTSAATVTVSSSQSPTSSPAQQSSTPAGSSTVTVQQSSSFQSPQSTTQ 982

Query: 509  FSDSFTTAPSEQVFRMTSADPTSS 438
               S TT PS Q    TS  PT++
Sbjct: 983  IGSS-TTVPSTQAPSSTSGGPTTT 1005


>U41271-3|AAP31439.1|  577|Caenorhabditis elegans Hypothetical
           protein C46H3.2b protein.
          Length = 577

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = -2

Query: 677 KTFSPHSSTGSSKAELT*RAVSAIFKTSRSAKSSPTSGQINENRC 543
           K  + ++S GSS ++ +    SA   TS SA S P+  Q NE+ C
Sbjct: 109 KVENHYASIGSSSSQSSSGFESAKCSTSTSASSFPSGVQSNESGC 153


>U41271-2|AAA82444.3|  713|Caenorhabditis elegans Hypothetical
           protein C46H3.2a protein.
          Length = 713

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = -2

Query: 677 KTFSPHSSTGSSKAELT*RAVSAIFKTSRSAKSSPTSGQINENRC 543
           K  + ++S GSS ++ +    SA   TS SA S P+  Q NE+ C
Sbjct: 245 KVENHYASIGSSSSQSSSGFESAKCSTSTSASSFPSGVQSNESGC 289


>U23179-11|AAN63447.1|  293|Caenorhabditis elegans Hypothetical
           protein C27D6.4c protein.
          Length = 293

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = -2

Query: 668 SPHSSTGSSKAELT*RAVSAIFKTSRSAKSSPTSGQINENRCLKFGNPMCTIPFSDSFTT 489
           SPHSSTG      +  + S+   +    K  P    ++      FGN +   PFS S T+
Sbjct: 13  SPHSSTGEDYHGSSSGSPSSSLSSPNEFKDEPLGLDVH------FGNSLFNAPFSPSATS 66

Query: 488 APSEQVFRM 462
           + S   + M
Sbjct: 67  SHSPSSYGM 75


>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
          Length = 2553

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +2

Query: 725 MDIEGVHPKKRTTEKQNVQKLVSKWLPEEKVMQLDKKSDGLNLLRKIGNQXRTYSS*REK 904
           +D   V PK+    K+N +K+V+ +       +LD KS  ++L R +     T+   +EK
Sbjct: 287 LDGRDVLPKEYAKNKENEKKVVAMYKELSGTSELDAKSKYVHLCRGLKTYGVTFFVVKEK 346


>AC025726-18|AAK73910.1|  996|Caenorhabditis elegans Hypothetical
           protein Y71G12B.11b protein.
          Length = 996

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +2

Query: 725 MDIEGVHPKKRTTEKQNVQKLVSKWLPEEKVMQLDKKSDGLNLLRKIGNQXRTYSS*REK 904
           +D   V PK+    K+N +K+V+ +       +LD KS  ++L R +     T+   +EK
Sbjct: 287 LDGRDVLPKEYAKNKENEKKVVAMYKELSGTSELDAKSKYVHLCRGLKTYGVTFFVVKEK 346


>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
           protein Y71G12B.11a protein.
          Length = 2553

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +2

Query: 725 MDIEGVHPKKRTTEKQNVQKLVSKWLPEEKVMQLDKKSDGLNLLRKIGNQXRTYSS*REK 904
           +D   V PK+    K+N +K+V+ +       +LD KS  ++L R +     T+   +EK
Sbjct: 287 LDGRDVLPKEYAKNKENEKKVVAMYKELSGTSELDAKSKYVHLCRGLKTYGVTFFVVKEK 346


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,935,448
Number of Sequences: 27780
Number of extensions: 420147
Number of successful extensions: 1311
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1310
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)