Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_D05
         (880 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006832-6|AAY55905.1|  170|Caenorhabditis elegans Hypothetical ...    32   0.62 
AC024746-13|AAF60407.2|  480|Caenorhabditis elegans Hypothetical...    31   1.4  
AF040649-4|ABS19468.1|  152|Caenorhabditis elegans Hypothetical ...    30   1.9  
U41279-23|AAK31429.1|  346|Caenorhabditis elegans Hypothetical p...    30   2.5  
U41279-19|AAK31428.1|  357|Caenorhabditis elegans Hypothetical p...    30   2.5  
Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm rece...    29   5.8  
AC006795-4|AAK84612.2|  430|Caenorhabditis elegans Hypothetical ...    29   5.8  
Z74041-1|CAA98520.1|  255|Caenorhabditis elegans Hypothetical pr...    28   7.7  
U97009-10|AAC69033.1|  533|Caenorhabditis elegans Udp-glucuronos...    28   7.7  
AC006832-7|AAF39999.1|  505|Caenorhabditis elegans Hypothetical ...    28   7.7  

>AC006832-6|AAY55905.1|  170|Caenorhabditis elegans Hypothetical
           protein ZK355.7 protein.
          Length = 170

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 8/163 (4%)
 Frame = +1

Query: 241 SDGKIYTIHA----DINDNRIEKGVYEVDLNLNTTVKILDKGRDLCYDDDSTIYVASNDG 408
           S  K+  IHA     +N++R    +Y  +L     +  L    D  + D   + V  NDG
Sbjct: 5   SKSKVQNIHARYCESLNESRPIYPIYFFNLCYYEKLSTLADDCDAIFGD---VVVDVNDG 61

Query: 409 IYVYKTGDKSFKKYGTFKADVISLTKMNGSD----LFYAVTNDNKAYKVTENGNKYVLDD 576
            Y+YK        +G+ K   I  TK+ G D    L +  + D     V    N Y+   
Sbjct: 62  RYLYKFFGVG-NIFGSLK---IQYTKIEGLDFLLGLDFVGSLDASQTPVLIRSNNYLKQA 117

Query: 577 NLKAVKQVMFDNFNVLHYVTLDNEVFKVKETMEKIDFNVKIDY 705
            L     +  +N  ++ Y      +   +  M +IDF++K+DY
Sbjct: 118 FLLLNNIISANNDQLVMYDNPSLFLNNQQCLMYQIDFDIKMDY 160


>AC024746-13|AAF60407.2|  480|Caenorhabditis elegans Hypothetical
           protein Y110A2AL.12a protein.
          Length = 480

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = -3

Query: 506 NKSLPFIFVRLITSALKVPYFLKLLSPVLYTYIPSLLATYIV 381
           N +LP+IF+       +  Y+LK ++ V++  +PSLLA  ++
Sbjct: 42  NLTLPWIFLGRRYDTGRFTYWLKFVADVIFLCVPSLLAMTVL 83


>AF040649-4|ABS19468.1|  152|Caenorhabditis elegans Hypothetical
           protein F33H12.7 protein.
          Length = 152

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 11/35 (31%), Positives = 25/35 (71%)
 Frame = +1

Query: 487 MNGSDLFYAVTNDNKAYKVTENGNKYVLDDNLKAV 591
           ++G+D  ++V++ +  Y++   G+KY  DDN++A+
Sbjct: 25  LSGADYLFSVSSGSSTYQI---GDKYSYDDNMEAI 56


>U41279-23|AAK31429.1|  346|Caenorhabditis elegans Hypothetical
           protein C17C3.1b protein.
          Length = 346

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
 Frame = -2

Query: 807 DNFQYSCRFNNHQVVVD*KXKGVIFSCARLQEPNVIDFNIKIDFFHSLFHFKYFIIQSDI 628
           D+F  S   N  Q        G+IFS A       +D   K    HS     YFI+  D 
Sbjct: 52  DSFSPSTLSNGRQAHHGAAYGGLIFSQALAAAEKTVDEQFKPHSMHS-----YFILNVDT 106

Query: 627 VQYIEVIKHNLFDGFQIIIQNVFVTIFSDFVSFIVVC-YGVKQIASV 490
            + I      + DG   I + V   +  D V F++ C + V++ +S+
Sbjct: 107 KEPISYNVRRIRDGRSFITRTV-EAVQKDKVCFVLQCSFHVEEKSSI 152


>U41279-19|AAK31428.1|  357|Caenorhabditis elegans Hypothetical
           protein C17C3.1a protein.
          Length = 357

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
 Frame = -2

Query: 807 DNFQYSCRFNNHQVVVD*KXKGVIFSCARLQEPNVIDFNIKIDFFHSLFHFKYFIIQSDI 628
           D+F  S   N  Q        G+IFS A       +D   K    HS     YFI+  D 
Sbjct: 63  DSFSPSTLSNGRQAHHGAAYGGLIFSQALAAAEKTVDEQFKPHSMHS-----YFILNVDT 117

Query: 627 VQYIEVIKHNLFDGFQIIIQNVFVTIFSDFVSFIVVC-YGVKQIASV 490
            + I      + DG   I + V   +  D V F++ C + V++ +S+
Sbjct: 118 KEPISYNVRRIRDGRSFITRTV-EAVQKDKVCFVLQCSFHVEEKSSI 163


>Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical
           protein F33E2.6 protein.
          Length = 846

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = -3

Query: 221 TKAPTT*SSVEYSSTLRCLKTEPLSTLEAVTLSPTTKM 108
           T+APTT + +  +     L+TE L T ++ T++P TK+
Sbjct: 798 TEAPTTEAPMTITPRTEQLRTEQLRTDQSKTVTPKTKI 835


>Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical
           protein T19C4.2 protein.
          Length = 313

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 19/55 (34%), Positives = 32/55 (58%)
 Frame = -3

Query: 680 IFSIVSFTLNTSLSKVT*CNTLKLSNITCLTAFKLSSKTYLLPFSVTL*ALLSFV 516
           ++ ++ F +NT  + +T   TLKLS++TC T   LSS   +L  + TL  + S +
Sbjct: 38  VWYLLDFLMNTLTTGIT-FYTLKLSSVTCQTC-ALSSIYLMLENNFTLNIMYSLM 90


>AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm
           receptor protein 66 protein.
          Length = 331

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -2

Query: 579 IIIQNVFVTIFSDFVSFIVVCYGVKQIASVHFC*AYNVSFES--TIFFKAFISGFIYIYP 406
           I I N F+T++S    F +  +      SV F   Y   F+S  T FF+ F  G   +YP
Sbjct: 84  INISNAFITVWS---CFYLTTFS---FISVLFIYRYLCLFDSSKTRFFEGFKGGLWMLYP 137

Query: 405 VIASYVYRAVI 373
           ++    Y + I
Sbjct: 138 LLPGICYASTI 148


>AC006795-4|AAK84612.2|  430|Caenorhabditis elegans Hypothetical
           protein Y50D4B.4 protein.
          Length = 430

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = -2

Query: 702 IDFNIKIDFFHSLFHFKYFIIQSDIVQYIEVIKHNLFDGFQIIIQNVFVTIF 547
           I FN KI FF++ FH  Y  I  D  + I++ K  L D  +  ++NV V ++
Sbjct: 376 IPFNGKITFFNNAFHRLYLNITLD--EDIQIFKTKLDD--EGSLENVSVEVY 423


>Z74041-1|CAA98520.1|  255|Caenorhabditis elegans Hypothetical
           protein T03F7.5 protein.
          Length = 255

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = -2

Query: 516 YGVKQIASVHFC*AYNVSFESTIFFKAF-ISGFIYIYPVIASYVYRAVII 370
           + ++++ S+ F        + T+FFK F ++GF++      SYVY  VI+
Sbjct: 54  FTIERVLSIQFS-----KIQRTLFFKLFFLAGFVFENGFAISYVYTNVIL 98


>U97009-10|AAC69033.1|  533|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein11 protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
 Frame = -2

Query: 672 HSLFHFKYFIIQSDIVQYIEV--IKHNLFDGFQIIIQNVFVTIFSDFVSFIVVCYGVKQI 499
           H  F  K+  ++S I +  +V  I H   D   +I+  +FV+I + ++SF +VC  + +I
Sbjct: 469 HLEFAIKFPNLRSQIPEINQVGPIAHYYLD---VIVFLIFVSIITAYISFQIVCRILSRI 525

Query: 498 AS 493
            S
Sbjct: 526 LS 527


>AC006832-7|AAF39999.1|  505|Caenorhabditis elegans Hypothetical
           protein ZK355.5 protein.
          Length = 505

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
 Frame = +1

Query: 343 LDKGRDLCYDDDSTIYVASNDGIYVYKTGDKSFKKYGTFKADVISLTKMNG----SDLFY 510
           L    + C      + V +NDG Y+YK     +  +GT K   I  +K +G    +DL Y
Sbjct: 352 LSSSEENCTALVGNVVVDANDGRYLYKLFKIKY-IFGTLK---IQYSKSDGLYFLTDLNY 407

Query: 511 AVTNDNKAYKVTENGNKYVLDDNLKAVKQVM 603
               D     V    N Y++  NL  +  ++
Sbjct: 408 IGNLDASIPAVLIRSNNYLIKPNLPVIMNII 438


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,297,154
Number of Sequences: 27780
Number of extensions: 361532
Number of successful extensions: 1153
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)