Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_D01
         (876 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0317 - 7414477-7414555,7414646-7414701,7415877-7416024,741...    31   0.92 
04_03_0379 + 15141127-15141231,15141566-15141769,15141856-151420...    31   1.2  
04_03_0349 - 14738360-14738385,14738762-14738807,14738887-147391...    31   1.2  
04_04_0411 - 25014511-25015015,25015098-25015169,25015700-250157...    29   3.7  
12_02_0437 - 19084990-19087695                                         29   4.9  
03_05_0472 - 24655384-24655764,24655904-24656119,24656197-246563...    28   8.5  

>03_02_0317 -
           7414477-7414555,7414646-7414701,7415877-7416024,
           7416376-7416380,7416512-7416594,7416707-7416878
          Length = 180

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +2

Query: 266 MSLQWTIIATFLYTEIAVVLLLTLPIASPSRWQ 364
           M+LQW I+A  +  E AV ++LTLP     R Q
Sbjct: 1   MALQWMILACVVAAEAAVAVMLTLPAPRAVRKQ 33


>04_03_0379 +
           15141127-15141231,15141566-15141769,15141856-15142037,
           15142898-15143036,15143111-15143299,15143943-15144050,
           15144143-15144222,15144549-15144600,15144731-15144799,
           15144876-15144910,15145351-15145510,15147414-15147470,
           15147566-15147622,15147971-15148027,15148126-15148182,
           15148551-15148670,15148760-15148996,15149550-15149591
          Length = 649

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
 Frame = -2

Query: 263 FHYFFNTVINYTMQQTIVEEQQTMTKFLGXRVTIDLK---IEKILLCMTQTV 117
           FH+FF TV N T Q+ ++   +T+ KF+   +T D++   I+ +  C+ Q V
Sbjct: 156 FHHFFRTVSN-THQEHVISYMETIMKFVIEDIT-DMEQDLIKDLASCLLQNV 205


>04_03_0349 -
           14738360-14738385,14738762-14738807,14738887-14739123,
           14739213-14739332,14739702-14739758,14740262-14740318,
           14740412-14740468,14742372-14742531,14742972-14743006,
           14743083-14743151,14743282-14743333,14743660-14743739,
           14743832-14743939,14744583-14744771,14744846-14744984,
           14745845-14746026,14746113-14746316,14746651-14746755
          Length = 640

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
 Frame = -2

Query: 263 FHYFFNTVINYTMQQTIVEEQQTMTKFLGXRVTIDLK---IEKILLCMTQTV 117
           FH+FF TV N T Q+ ++   +T+ KF+   +T D++   I+ +  C+ Q V
Sbjct: 156 FHHFFRTVSN-THQEHVISYMETIMKFVIEDIT-DMEQDLIKDLASCLLQNV 205


>04_04_0411 -
           25014511-25015015,25015098-25015169,25015700-25015734,
           25015805-25015873,25015993-25016044,25016444-25016526,
           25016625-25016726,25017150-25017884,25017962-25018012,
           25018792-25018983,25019066-25019216,25020012-25020193,
           25020329-25020532,25020752-25020859
          Length = 846

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -2

Query: 263 FHYFFNTVINYTMQQTIVEEQQTMTKFL 180
           FH+FF T+ N T Q+ ++   +T+ KF+
Sbjct: 157 FHHFFRTISN-THQENVITSMETVMKFV 183


>12_02_0437 - 19084990-19087695
          Length = 901

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +3

Query: 471 RCKNIQILNRQTTSISTPKCKVT-*DCFVHRETSTYLALHFSSLSSSVVWFK*FH 632
           R KN+Q L+ + TS+S   C++T   C  H   ST   L+ +S S +V   +  H
Sbjct: 626 RLKNLQTLHLRRTSVSELPCEITLLACLRHLSVST--DLYGTSFSGNVYGLRSLH 678


>03_05_0472 -
           24655384-24655764,24655904-24656119,24656197-24656321,
           24656432-24656621,24656817-24656911,24657230-24657454,
           24657940-24658003
          Length = 431

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -1

Query: 564 FLCARNNLMLPCISASRCWWSDGSIFE--YFCISRIASSRHNTSTPMR 427
           F+CA     +P +SA R W    ++F   Y  I+ + S R   +TP +
Sbjct: 151 FVCALFAFGIPYLSALRIWLGLSTVFSLIYIMIAFVMSLRDGITTPAK 198


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,579,873
Number of Sequences: 37544
Number of extensions: 342846
Number of successful extensions: 699
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)