Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_C24
(902 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0264 + 2030080-2031270 228 4e-60
01_02_0051 - 10655867-10657057 227 1e-59
01_03_0090 - 12347165-12348349 226 2e-59
12_02_0655 + 21588662-21589051 31 1.3
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 30 2.2
10_06_0022 - 9716537-9716649,9716709-9716826,9716958-9717076,971... 29 3.8
05_03_0623 - 16307969-16308323,16308428-16308482,16309413-163095... 29 3.8
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 29 3.8
02_01_0375 + 2712289-2712957 29 5.1
12_01_0893 + 8650967-8651311 29 6.7
11_03_0073 - 9621199-9621312,9621401-9621476,9621553-9621619,962... 29 6.7
06_03_1153 - 28047125-28047751 28 8.8
>05_01_0264 + 2030080-2031270
Length = 396
Score = 228 bits (558), Expect = 4e-60
Identities = 111/181 (61%), Positives = 137/181 (75%), Gaps = 2/181 (1%)
Frame = +3
Query: 195 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 374
FLFTSESV EGHPDK+CDQ+SDA+LDA L +DPD+KVACET TKT MV++ GEIT+KANV
Sbjct: 7 FLFTSESVNEGHPDKLCDQVSDAVLDACLAEDPDSKVACETCTKTNMVMVFGEITTKANV 66
Query: 375 DYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQSPNIAEGV--YLDREEIDIGAGDQ 548
DY+K+VRET ++IG+ + G D +LV IE+QSP+IA+GV + + +IGAGDQ
Sbjct: 67 DYEKIVRETCRNIGFVSADVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQ 126
Query: 549 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGAT 728
G MFGYATDET E MPL+ VLA KL ++ E+R+NG W RPD KTQVT EY GA
Sbjct: 127 GHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYRNESGAR 186
Query: 729 V 731
V
Sbjct: 187 V 187
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 815 VIKEVIPAQYLDERTVXXL 871
VIK VIP QYLDE+T+ L
Sbjct: 217 VIKPVIPEQYLDEKTIFHL 235
>01_02_0051 - 10655867-10657057
Length = 396
Score = 227 bits (554), Expect = 1e-59
Identities = 111/187 (59%), Positives = 138/187 (73%), Gaps = 2/187 (1%)
Frame = +3
Query: 177 MEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEI 356
M + FLFTSESV EGHPDK+CDQISDA+LDA L +DP++KVACET TKT MV++ GEI
Sbjct: 1 MAEVDTFLFTSESVNEGHPDKLCDQISDAVLDACLAEDPESKVACETCTKTNMVMVFGEI 60
Query: 357 TSKANVDYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQSPNIAEGV--YLDREEID 530
T+KANVDY+K+VR+T + IG+ + G D +LV IE+QSP+IA+GV + + +
Sbjct: 61 TTKANVDYEKIVRDTCRGIGFVSNDVGLDAEHCKVLVNIEQQSPDIAQGVHGHFTKRPEE 120
Query: 531 IGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYV 710
IGAGDQG MFGYATDET E MPL+ VLA KL ++ E+R+NG W RPD KTQVT EY
Sbjct: 121 IGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGACAWLRPDGKTQVTVEYQ 180
Query: 711 FAGGATV 731
GA V
Sbjct: 181 NDNGAMV 187
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 815 VIKEVIPAQYLDERTVXXL 871
VIK VIP QYLDE+T+ L
Sbjct: 217 VIKPVIPEQYLDEKTIFHL 235
>01_03_0090 - 12347165-12348349
Length = 394
Score = 226 bits (552), Expect = 2e-59
Identities = 110/181 (60%), Positives = 135/181 (74%), Gaps = 2/181 (1%)
Frame = +3
Query: 195 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 374
FLFTSESV EGHPDK+CDQ+SDA+LDA L QDPD+KVACET TKT MV++ GEIT+KA V
Sbjct: 6 FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKATV 65
Query: 375 DYQKVVRETVKHIGYDDSSKGFDWRTLNLLVAIEEQSPNIAEGV--YLDREEIDIGAGDQ 548
DY+K+VR+T + IG+ G D +LV IE+QSP+IA+GV + + +IGAGDQ
Sbjct: 66 DYEKIVRDTCRGIGFVSDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQ 125
Query: 549 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGAT 728
G MFGYATDET E MPL+ VLA KL ++ E+R+NG W RPD KTQVT EY+ GA
Sbjct: 126 GHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYLNDAGAM 185
Query: 729 V 731
V
Sbjct: 186 V 186
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 815 VIKEVIPAQYLDERTVXXL 871
VIK VIP +YLDE+T+ L
Sbjct: 216 VIKPVIPDKYLDEKTIFHL 234
>12_02_0655 + 21588662-21589051
Length = 129
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +2
Query: 143 WIRENQRTQL*YGRWISIFVHIGICWRGSSRQNVRPNKRRYSRRAPESGSGRK 301
WI QR ++ G W RGS V P +RR SRR P SG R+
Sbjct: 27 WIGGRQRPRMWIGDWREE--------RGSVAVGVAPGRRRESRRRPGSGEARR 71
>05_07_0212 + 28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 30.3 bits (65), Expect = 2.2
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Frame = +3
Query: 432 KGFDWRTLNLLVAIEEQSPNIAEGVY-LDREEIDIGAGDQGLMFGYATDETEECMPLTVV 608
K + R ++ + + N EG+ L EE+ IG+ +F + + CM T
Sbjct: 838 KSVEIRLYKVIYDLIDDLRNAMEGLLELAEEEVPIGSAKVRAVFSSGSGKVAGCMITTGK 897
Query: 609 LAHKLNQKIAELRRNGEFWWARPDSKTQV--TCEYVFAG 719
+ H N ++ LR+ E + DS +V T + V AG
Sbjct: 898 VVHDCNVRV--LRKGKEVYMGTLDSLRRVKETVKEVGAG 934
>10_06_0022 -
9716537-9716649,9716709-9716826,9716958-9717076,
9717238-9717476,9717793-9717849,9717933-9718019,
9718185-9718729,9718836-9719102
Length = 514
Score = 29.5 bits (63), Expect = 3.8
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +3
Query: 303 VACETITKTGMVLLCGEITSKANVDYQKVVRET--VKHIGYDDSSKGFDWRTLNLLVAIE 476
+ C +I+K GM+L IT + D+ K VR+ KH GY KG +++ N +
Sbjct: 444 LVCGSISKVGMLLF---ITLRT--DWGKEVRKPSPYKHFGYHGKRKGLQFKSSNSM---- 494
Query: 477 EQSPNIAEGVYLDREEI 527
+ S N+ GV E++
Sbjct: 495 KNSRNV--GVVFSNEDV 509
>05_03_0623 -
16307969-16308323,16308428-16308482,16309413-16309509,
16309587-16309592
Length = 170
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 593 HAFFCLICCITEHQALISSPYIYFFSVKIHTLSNIW 486
H C I C + I P+++F K+H +N W
Sbjct: 37 HVRICPIICDANAKRFIWFPHLFFSGAKMHQCNNSW 72
>03_05_0640 -
26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 29.5 bits (63), Expect = 3.8
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +3
Query: 180 EDGSVFLFTSESVGEGHPDKM---CDQISDAILDAHLNQDPDAKVACETITKTGMVLLC 347
+DGS +LFTS+ E HP M D+ S+ IL E I K G L C
Sbjct: 765 QDGSEWLFTSKRTDESHPFTMHVNFDKFSEDILVGDELVIDGGMATFEVIEKVGNDLRC 823
>02_01_0375 + 2712289-2712957
Length = 222
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 603 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYV 710
VV +L++ + +++G WW RPDS EY+
Sbjct: 164 VVYWGRLSKALVWWKQSGNNWWPRPDSDLGEDFEYI 199
>12_01_0893 + 8650967-8651311
Length = 114
Score = 28.7 bits (61), Expect = 6.7
Identities = 9/14 (64%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
Frame = +2
Query: 707 CICWWC-NSPQRVI 745
C CWWC SP+RV+
Sbjct: 55 CACWWCLTSPRRVV 68
>11_03_0073 -
9621199-9621312,9621401-9621476,9621553-9621619,
9621655-9621751,9621898-9621996,9622348-9622358,
9622716-9622784,9622871-9623195,9623287-9623457,
9623538-9623713,9624173-9624414,9624481-9624542,
9625305-9625340,9626103-9626262,9626372-9626606,
9626694-9626949,9627062-9627176,9628388-9628450,
9628592-9629325
Length = 1035
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 405 KHIGYDDSSKGFDWRTLNLLVAIEEQSPN 491
KH+ + S GFDWRT ++ + Q N
Sbjct: 386 KHLDKESESDGFDWRTRYNIIKVISQGLN 414
>06_03_1153 - 28047125-28047751
Length = 208
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 197 FVHIGICWRG-SSRQNVRPNKRRYSRRAPESGSGRKSCM*NHN*NRYGA 340
+++ CW+ ++ P Y R P +G GR +H+ + YGA
Sbjct: 106 YIYRSQCWKSLKKKKKPPPPLPLYRPRPPPAGDGRPDVTVHHHHHHYGA 154
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,653,422
Number of Sequences: 37544
Number of extensions: 535766
Number of successful extensions: 1309
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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