Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_C23
         (861 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065821-1|BAC06040.1|  318|Homo sapiens seven transmembrane hel...    33   1.8  
U41060-1|AAA96258.2|  749|Homo sapiens estrogen regulated LIV-1 ...    30   9.4  
BC039498-1|AAH39498.1|  433|Homo sapiens SLC39A6 protein protein.      30   9.4  

>AB065821-1|BAC06040.1|  318|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 318

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
 Frame = -3

Query: 778 FMPISSVKYVSLCSSLLYKXGVRIIGFVNEVVVFLV--NAILSCGFRINEAMLHLCYVNF 605
           FM ++  +YV++C  L Y   +    FV +  VF+V  NA+L+    I  ++LH C  N 
Sbjct: 122 FMVMAYDRYVAICHPLRYP-SIITNQFVAKASVFIVVRNALLTAPIPILTSLLHYCGENV 180

Query: 604 LQH 596
           +++
Sbjct: 181 IEN 183


>U41060-1|AAA96258.2|  749|Homo sapiens estrogen regulated LIV-1
           protein protein.
          Length = 749

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -3

Query: 778 FMPISSVKYVSLCSSLLYKXGVRIIGFVNEVVVFLVNAILSCGFRINEAMLHLCYVNFLQ 599
           F+ IS + ++SL   +L     R+  F   ++ FLV   L+ G    +A LHL   +   
Sbjct: 323 FIAISIISFLSLLGVILVPLMNRV--FFKFLLSFLV--ALAVGTLSGDAFLHLLPHSHAS 378

Query: 598 HFHIHKH 578
           H H H H
Sbjct: 379 HHHSHSH 385


>BC039498-1|AAH39498.1|  433|Homo sapiens SLC39A6 protein protein.
          Length = 433

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -3

Query: 778 FMPISSVKYVSLCSSLLYKXGVRIIGFVNEVVVFLVNAILSCGFRINEAMLHLCYVNFLQ 599
           F+ IS + ++SL   +L     R+  F   ++ FLV   L+ G    +A LHL   +   
Sbjct: 54  FIAISIISFLSLLGVILVPLMNRV--FFKFLLSFLV--ALAVGTLSGDAFLHLLPHSHAS 109

Query: 598 HFHIHKH 578
           H H H H
Sbjct: 110 HHHSHSH 116


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,008,256
Number of Sequences: 237096
Number of extensions: 2103166
Number of successful extensions: 3806
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3806
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)