Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_C21
         (1055 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-1...    32   3.1  
AB209423-1|BAD92660.1| 1103|Homo sapiens myosin XV variant protein.    32   3.1  

>AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-15
           protein.
          Length = 3530

 Score = 32.3 bits (70), Expect = 3.1
 Identities = 25/66 (37%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
 Frame = +2

Query: 728 RXGQPRPGLSKXTIXFPPCKRP-XRXASPWFXXRXPAYPGLPCSXLSXPFPXQPXGXFLX 904
           R  QPR   S      PP  +P  R  S W     P  P  P S  S P P  P    L 
Sbjct: 629 RRAQPR-ARSSNDARRPPAPQPAPRTLSHWSALLSPPVPPRPPS--SGPPPAPPLSPALS 685

Query: 905 SLPRPA 922
            LPRPA
Sbjct: 686 GLPRPA 691


>AB209423-1|BAD92660.1| 1103|Homo sapiens myosin XV variant protein.
          Length = 1103

 Score = 32.3 bits (70), Expect = 3.1
 Identities = 25/66 (37%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
 Frame = +2

Query: 728 RXGQPRPGLSKXTIXFPPCKRP-XRXASPWFXXRXPAYPGLPCSXLSXPFPXQPXGXFLX 904
           R  QPR   S      PP  +P  R  S W     P  P  P S  S P P  P    L 
Sbjct: 506 RRAQPR-ARSSNDARRPPAPQPAPRTLSHWSALLSPPVPPRPPS--SGPPPAPPLSPALS 562

Query: 905 SLPRPA 922
            LPRPA
Sbjct: 563 GLPRPA 568


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,504,363
Number of Sequences: 237096
Number of extensions: 1775195
Number of successful extensions: 4862
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4859
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14373664760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)