Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_C21
         (1055 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067616-11|AAC19194.2|  627|Caenorhabditis elegans Collagen pro...    30   2.4  
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ...    28   9.7  

>AF067616-11|AAC19194.2|  627|Caenorhabditis elegans Collagen
           protein 99 protein.
          Length = 627

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 19/48 (39%), Positives = 22/48 (45%)
 Frame = -3

Query: 891 PXGCXGKGXERXEQGNPG*AGXRXXNQGEAXRXGLLQGGKXMVXFDSP 748
           P G  G+  ER E+G PG  G      G A    LL GGK +V    P
Sbjct: 294 PQGPPGEKGERGERGEPGDRGL----PGAAGAANLLNGGKALVGPPGP 337


>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
            isoform b protein.
          Length = 2692

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 17/66 (25%), Positives = 23/66 (34%)
 Frame = +3

Query: 621  PPXRPRXP*KGRVAGVXPXASRPPXXPSQKSXAXRSXVANPXRDYQRXPSVSPPAKDPXV 800
            PP +P+ P K  +  V    S PP        A    +  P  DY   P +      P +
Sbjct: 1951 PPQQPQQPKKMHIPPVTRATSPPPPAQKSPQPAPFHSITEPLSDYPVPPPLGSLVGLPPM 2010

Query: 801  XLLLGS 818
               L S
Sbjct: 2011 PAYLSS 2016


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,054,107
Number of Sequences: 27780
Number of extensions: 237503
Number of successful extensions: 312
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 312
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2814342022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)