Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_C20
         (945 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0461 + 3492302-3492413,3492868-3492964,3493053-3493131,349...    30   3.1  
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249...    29   4.1  
08_02_1035 - 23840606-23841109,23841194-23841199                       29   5.4  
07_03_1750 - 29207692-29208225                                         29   5.4  
07_03_1136 + 24218601-24218734,24218769-24219906                       29   5.4  

>07_01_0461 +
           3492302-3492413,3492868-3492964,3493053-3493131,
           3493484-3493794,3494219-3494231
          Length = 203

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +2

Query: 614 RPPXRPSPXXTLXSAVAXPXRTIXIPXVSPWXAPPGAXL 730
           RPP  P+P      A   P  ++    V P  APP A L
Sbjct: 121 RPPPEPTPTPAPAPAAVPPSASVPSTVVPPVAAPPSALL 159


>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
            27125387-27125656,27126027-27126377,27126480-27126757,
            27126887-27128330
          Length = 1398

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 35/119 (29%), Positives = 41/119 (34%), Gaps = 1/119 (0%)
 Frame = -3

Query: 919  PGG-PGXXNRGGXGETQAPXXGAERXDXPXXEXPXKAGPXGAXGAXXPXGGRADRXPGKR 743
            PGG  G    GG G    P     R + P      + GP G  G   P G    + PG  
Sbjct: 1036 PGGFGGRDGPGGFGGRDGPGGFIGR-EGPGG-FGGREGPVGFGGQESPGGFGGRKGPGAF 1093

Query: 742  AGSEQXSAXGSXPGGNXRYXYSPXGXXXXXXXXXXXXRXXRGAEPXXGRQRRGXFTGPG 566
             G E  +A GS  GG         G            R  RG     G + RG F+G G
Sbjct: 1094 EGRE-GAAPGSF-GGRGGRGPGGFGGRGGGSPGGFGGRGGRGDSHGFGGRGRGDFSGFG 1150


>08_02_1035 - 23840606-23841109,23841194-23841199
          Length = 169

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 17/59 (28%), Positives = 19/59 (32%)
 Frame = -1

Query: 792 AXXARXGEGRTGXPESGQGRNRXAPGGAXQGETXGXXIVRXGWATADXSVXXGDGRXGG 616
           A   R G    G    G G       G   G   G  +V  GWA    +     GR GG
Sbjct: 39  AGGERTGGSAVGAEAWGDGVAAALGAGTGAGAETGGGVVTGGWAAGGDTGATAGGRVGG 97


>07_03_1750 - 29207692-29208225
          Length = 177

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 19/64 (29%), Positives = 22/64 (34%)
 Frame = +2

Query: 734 RPCPLSGXPVRPSPXRAXXAACXXGSRLVXXLXXRVVXSFRSXXXGLGFPXXPPVXXPRP 913
           RP P S   VR +  RA   A    SR    +      +       LG P  PP   P P
Sbjct: 51  RPSPASSREVRHAADRALAVAARGRSRWSRAILASRARACALRRVRLGAPPPPPAARPAP 110

Query: 914 PXXP 925
              P
Sbjct: 111 RSRP 114


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/47 (34%), Positives = 17/47 (36%)
 Frame = -3

Query: 808 PXGAXGAXXPXGGRADRXPGKRAGSEQXSAXGSXPGGNXRYXYSPXG 668
           P G  GA  P GG   R PG   G    S      GG      +P G
Sbjct: 91  PPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGG 137


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,577,458
Number of Sequences: 37544
Number of extensions: 237660
Number of successful extensions: 823
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)