Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_C19
         (868 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46934-11|CAE18043.1|  497|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z46934-10|CAD18882.1|  495|Caenorhabditis elegans Hypothetical p...    30   1.9  
U13019-4|AAC24451.1|  222|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch...    28   9.9  
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch...    28   9.9  
AL117203-7|CAB55109.1|  191|Caenorhabditis elegans Hypothetical ...    28   9.9  

>Z46934-11|CAE18043.1|  497|Caenorhabditis elegans Hypothetical
           protein ZK1320.12b protein.
          Length = 497

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 202 DYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCM 312
           D D + EK +    +KK   IT++VN +IRN    C+
Sbjct: 205 DIDFSYEKVREAMSQKKRNGITSLVNYMIRNYPSICL 241


>Z46934-10|CAD18882.1|  495|Caenorhabditis elegans Hypothetical
           protein ZK1320.12a protein.
          Length = 495

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 202 DYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCM 312
           D D + EK +    +KK   IT++VN +IRN    C+
Sbjct: 205 DIDFSYEKVREAMSQKKRNGITSLVNYMIRNYPSICL 241


>U13019-4|AAC24451.1|  222|Caenorhabditis elegans Hypothetical
           protein T12A2.15b protein.
          Length = 222

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 492 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 590
           D KD+ +P VS KL+AL  N +V+ K   T +N
Sbjct: 120 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 152


>U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical
           protein T12A2.15a protein.
          Length = 713

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 492 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 590
           D KD+ +P VS KL+AL  N +V+ K   T +N
Sbjct: 611 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 643


>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
            protein 1 protein.
          Length = 4568

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
 Frame = +1

Query: 82   PKMKPAIVILCLFVASLYAADSD-VPNDILEEQLY--NSVVVADYDSAVEKSKH-LYEEK 249
            P +K  +V LC+   +LY + S     + + EQLY  +SV  A    + ++ +  + EE 
Sbjct: 922  PTVKNVVVDLCMTAQTLYISPSTRETREKILEQLYEWHSVCTAQMRISGKRFQMVMNEEI 981

Query: 250  KSEVITNVVNKLIRNNKMNCMEYAY 324
            + E   N++N  +      C+E AY
Sbjct: 982  EPETYHNILN--VMPEGQACLEKAY 1004


>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
            protein.
          Length = 4568

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
 Frame = +1

Query: 82   PKMKPAIVILCLFVASLYAADSD-VPNDILEEQLY--NSVVVADYDSAVEKSKH-LYEEK 249
            P +K  +V LC+   +LY + S     + + EQLY  +SV  A    + ++ +  + EE 
Sbjct: 922  PTVKNVVVDLCMTAQTLYISPSTRETREKILEQLYEWHSVCTAQMRISGKRFQMVMNEEI 981

Query: 250  KSEVITNVVNKLIRNNKMNCMEYAY 324
            + E   N++N  +      C+E AY
Sbjct: 982  EPETYHNILN--VMPEGQACLEKAY 1004


>AL117203-7|CAB55109.1|  191|Caenorhabditis elegans Hypothetical
           protein Y48C3A.10 protein.
          Length = 191

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 427 RLYISLIAFSAKISLNSXWETIPDDVPWSPGAKVDRRT 314
           R + SL+AF+ +++       IPDD  +S    VD ++
Sbjct: 122 RSFRSLVAFAKELARQEGMNVIPDDAEFSYDVHVDNKS 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,951,983
Number of Sequences: 27780
Number of extensions: 234218
Number of successful extensions: 704
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)