Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_C07
(866 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 206 4e-54
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 182 4e-47
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 170 2e-43
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 146 5e-36
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 132 8e-32
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 113 2e-26
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 103 3e-23
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 76 8e-15
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 48 1e-06
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 28 2.0
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 27 2.6
SPAPB8E5.03 |mae1||malic acid transport protein Mae1 |Schizosacc... 27 3.5
SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces... 27 4.6
SPAPB24D3.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 8.0
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 206 bits (502), Expect = 4e-54
Identities = 94/132 (71%), Positives = 102/132 (77%)
Frame = +2
Query: 401 KLLRTLXALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKL 580
K ALCTGEKG+GY GS+FHR+IP FM QGGDFT NGTGGKSIYG F DENF L
Sbjct: 29 KTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFAL 88
Query: 581 KHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGSKSG 760
KH PG+LSMANAGPNTNGSQFFITTV TPWLD KHVVFG V EGMDVV+K+E LGS SG
Sbjct: 89 KHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSG 148
Query: 761 KPIKKVVISDSG 796
++VI G
Sbjct: 149 ATRARIVIDKCG 160
Score = 46.8 bits (106), Expect = 4e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +1
Query: 328 YFDVTADGEPLGRIVIKLNTDEVPKTAENF 417
+FDV A+G+PLGRIV KL D VPKTA NF
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANF 34
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 182 bits (444), Expect = 4e-47
Identities = 85/135 (62%), Positives = 101/135 (74%), Gaps = 1/135 (0%)
Frame = +2
Query: 401 KLLRTLXALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKL 580
K AL TGEKGFGY+GS FHR+IP+FM QGGD T +GTGGKSIYG F DENFKL
Sbjct: 54 KTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKL 113
Query: 581 KHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGSKS- 757
H PG+LSMANAGP++NGSQFFITTV TPWLD HVVFG V+ G D+V+K+ K + +
Sbjct: 114 SHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKISKAETDNR 173
Query: 758 GKPIKKVVISDSGEL 802
KP++ V I SG+L
Sbjct: 174 DKPLEDVKIIKSGQL 188
Score = 38.7 bits (86), Expect = 0.001
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = +1
Query: 325 VYFDVTADGEPLGRIVIKLNTDEVPKTAENFXSSVYW*KRFWVQGFI 465
VYFD+ E LGR+ I L VPKTAENF + K F +G I
Sbjct: 29 VYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSI 75
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 170 bits (414), Expect = 2e-43
Identities = 81/136 (59%), Positives = 98/136 (72%), Gaps = 4/136 (2%)
Frame = +2
Query: 401 KLLRTLXALCTGEKGFG----YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDE 568
K ++ +LC G + G YKGS FHR+I +FM QGGDFT NGTGG+SIYG F DE
Sbjct: 30 KTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDE 89
Query: 569 NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLG 748
NF+LKH P +LSMANAGPNTNGSQFFITTVPTP LD KHVVFG V++G V+ +E L
Sbjct: 90 NFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLE 149
Query: 749 SKSGKPIKKVVISDSG 796
+K+ P+ VVI + G
Sbjct: 150 TKNDDPVVPVVIEECG 165
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 328 YFDVTADGEPLGRIVIKLNTDEVPKTAENFXS 423
YF ++ DG+ I +L + VPKT +NF S
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFAS 37
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 146 bits (353), Expect = 5e-36
Identities = 76/143 (53%), Positives = 95/143 (66%), Gaps = 9/143 (6%)
Frame = +2
Query: 401 KLLRTLXALCTGE------KGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG-RTF 559
K CTGE K GYK S+FHRII FM QGGDF + +GTG +I+ RTF
Sbjct: 32 KTAENFRQFCTGETLGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTF 91
Query: 560 SDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKME 739
DENF LKH PG+LSMANAG ++NG QFFITTVP +LD KHVVFG V+EG D+V+++E
Sbjct: 92 PDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIE 151
Query: 740 K--LGSKSGKPIKKVVISDSGEL 802
+G+ S +P V I + GE+
Sbjct: 152 STPVGANS-RPKSNVAIVECGEM 173
Score = 40.7 bits (91), Expect = 3e-04
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1
Query: 304 STQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTAENF 417
ST+P V+ D+ DG LGRI I+L + VPKTAENF
Sbjct: 2 STEP--VVFMDIAIDGRLLGRIKIRLFSSIVPKTAENF 37
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 132 bits (318), Expect = 8e-32
Identities = 66/113 (58%), Positives = 78/113 (69%), Gaps = 2/113 (1%)
Frame = +2
Query: 452 YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDE-NFKLKHTGPGILSMANAGPN 628
Y G FHR+IPDF+ QGGD T G GG SIYG F DE + L HTG GILSMANAGPN
Sbjct: 38 YDGVIFHRVIPDFVIQGGDPTG-TGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPN 96
Query: 629 TNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGS-KSGKPIKKVVI 784
TN SQFFIT PTPWLD KH +FG VV G+ V ++M + + S +PI+ + I
Sbjct: 97 TNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRMGLIRTDSSDRPIEPLKI 149
Score = 29.1 bits (62), Expect = 0.86
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 358 LGRIVIKLNTDEVPKTAENF 417
LG+I+I+L T+ PKT +NF
Sbjct: 10 LGKILIELYTEHAPKTCQNF 29
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 113 bits (273), Expect = 2e-26
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
Frame = +2
Query: 437 EKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDE-NFKLKHTGPGILSMA 613
E G+ Y + FHRII +FM QGGD +GTGG+SI+ + F DE + LKH P +SMA
Sbjct: 487 ENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGESIWKKDFEDEISPNLKHDRPFTVSMA 544
Query: 614 NAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEK 742
N+GPNTNGSQFFITT TPWLD KH +F G+DVV ++E+
Sbjct: 545 NSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIEQ 587
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 103 bits (247), Expect = 3e-23
Identities = 53/103 (51%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Frame = +2
Query: 452 YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFK-LKHTGPGILSMANAGPN 628
Y+ + FHR I FM QGGD + G GG+SI+G+ F DE LKH GI+SMAN G N
Sbjct: 312 YRNTIFHRNIARFMIQGGD-PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKN 370
Query: 629 TNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGSKS 757
TNGSQFFI P LD KH +FG VV G++V+ +EK+ + S
Sbjct: 371 TNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNS 413
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 75.8 bits (178), Expect = 8e-15
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Frame = +2
Query: 401 KLLRTLXALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENF-K 577
K R LC +G+ Y G+ HR++P+F+ QGGD T G GG+SIYG F+ E +
Sbjct: 35 KACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGESIYGEPFAVETHPR 90
Query: 578 LKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVV 709
L+ G++ MA N SQFFIT PTP + K +FG VV
Sbjct: 91 LRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 48.4 bits (110), Expect = 1e-06
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Frame = +2
Query: 452 YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYG------RTFSDE-NFKLKHTGPGILSM 610
Y F+ I ++ CQ GD G GG+ ++ R F E N L H G++SM
Sbjct: 37 YNFCPFYNIQHNYTCQTGDPLGPTGDGGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSM 96
Query: 611 ANAGPNTN-------GSQFFITTVPT-PWLDRKHVVFGSVVEGMDVVQKM-EKLGSKSGK 763
+ A ++ GSQF IT LD ++ ++G V EG D + K+ + + + G+
Sbjct: 97 STATISSRDDKLLVCGSQFIITLSDNLEGLDERYPIYGQVAEGFDTLLKINDAICDEEGQ 156
Query: 764 PIKKVVISDSGELD 805
P + + I + LD
Sbjct: 157 PYRDIRIKHTIILD 170
>SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1205
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = -3
Query: 480 IIL*NDEPLYPKPFSP-VHRAXKVLSSFRYFIRVQFYDYTSQWLSVSSYIEINL 322
++L D L P +P + RA L++ +YF+++ + ++ + SSY++I+L
Sbjct: 852 VLLMADGELSPFKNTPKISRAYLRLTASKYFLKLCSIPFYAEHIDFSSYVQISL 905
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -2
Query: 370 LYVPMALRQQLHRNKLVYQVESKQNEVLQQSI 275
LYV +A R+++ R++L Q++++ LQQ +
Sbjct: 434 LYVALAQRKEVRRSQLEAQIQARNQFRLQQQV 465
>SPAPB8E5.03 |mae1||malic acid transport protein Mae1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 722 HPYLQPQTQILHVFYPTKESELWL*KIETHLYS 624
HP +P T +L+ +P +++ L K++TH+ S
Sbjct: 391 HPPPKPNTGVLNPTFPPEKAPASLEKVDTHVTS 423
>SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 369
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 716 MDVVQKMEKLGSKSGKPIKK 775
M+ +QKM+ L +K G+P KK
Sbjct: 1 MEPIQKMDSLNNKEGQPDKK 20
>SPAPB24D3.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 300
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 783 MTTFFIGL-PLLEPSFSIFCTTSIPSTTDPNTTCFLSNQGVGTVVIK 646
+ TF G PL+EP+F+ + + PN T Q VG + +K
Sbjct: 248 VATFTSGYSPLVEPAFTFASALNTTLNSFPNGTLPTQTQVVGDIGVK 294
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,484,706
Number of Sequences: 5004
Number of extensions: 75897
Number of successful extensions: 234
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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