Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_C06
         (932 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457114-1|CAG33395.1|  364|Homo sapiens HAVCR1 protein.               33   1.1  
BC013325-1|AAH13325.1|  364|Homo sapiens HAVCR1 protein protein.       33   1.1  
M22405-1|AAA36334.1|  278|Homo sapiens protein ( Human intestina...    32   2.6  
M57417-1|AAA63229.2|  294|Homo sapiens mucin protein.                  31   4.5  
AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellu...    31   4.5  
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.                  31   7.9  

>CR457114-1|CAG33395.1|  364|Homo sapiens HAVCR1 protein.
          Length = 364

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 22/65 (33%), Positives = 35/65 (53%)
 Frame = +1

Query: 253 TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 432
           TVPTT      T     TT  T++ +P TTT++ T T +STT  +  T      T+S+P+
Sbjct: 149 TVPTTTTVPMTTVPT--TTVPTTMSIPTTTTVLTTMT-VSTTTSVP-TTTSIPTTTSVPV 204

Query: 433 SLVLA 447
           +  ++
Sbjct: 205 TTTVS 209


>BC013325-1|AAH13325.1|  364|Homo sapiens HAVCR1 protein protein.
          Length = 364

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 22/65 (33%), Positives = 35/65 (53%)
 Frame = +1

Query: 253 TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 432
           TVPTT      T     TT  T++ +P TTT++ T T +STT  +  T      T+S+P+
Sbjct: 149 TVPTTTTVPMTTVPT--TTVPTTMSIPTTTTVLTTMT-VSTTTSVP-TTTSIPTTTSVPV 204

Query: 433 SLVLA 447
           +  ++
Sbjct: 205 TTTVS 209


>M22405-1|AAA36334.1|  278|Homo sapiens protein ( Human intestinal
           mucin mRNA, partial cds, clone SMUC 41. ).
          Length = 278

 Score = 32.3 bits (70), Expect = 2.6
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +1

Query: 247 T*TVPTTDPRGQETATN-LLTTARTSLILP-KTTTLMETATNLSTTVHITWT-VPKADLT 417
           T   PT  P G +T T  L+TT  T    P  T+T   T T ++TT  +T T  P    T
Sbjct: 39  TTVTPTPTPTGTQTPTTVLITTTTTMTPTPTPTSTKSTTVTPITTTTTVTATPTPTGTQT 98

Query: 418 -SSLPLSLVLAV 450
            + +P+S    V
Sbjct: 99  PTMIPISTTTTV 110


>M57417-1|AAA63229.2|  294|Homo sapiens mucin protein.
          Length = 294

 Score = 31.5 bits (68), Expect = 4.5
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +1

Query: 259 PTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 423
           PT  P G +T T    T  T+++ P T T+  T T   T +  T   P    TS+
Sbjct: 2   PTPTPTGTQTPTPTPITTTTTMVTP-TPTITSTQTPTPTPITTTTVTPTPTPTST 55



 Score = 31.5 bits (68), Expect = 4.5
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +1

Query: 259 PTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 423
           PT  P G +T T    T  T+++ P T T+  T T   T +  T   P    TS+
Sbjct: 222 PTPTPTGTQTPTPTPITTTTTMVTP-TPTITSTQTPTPTPITTTTVTPTPTPTST 275


>AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellular
           receptor 1 protein.
          Length = 359

 Score = 31.5 bits (68), Expect = 4.5
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +1

Query: 286 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP---KADLTSSLP 429
           T    +TT RTS  +P TTT+  T    + ++  T TVP       T+S+P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVP 186


>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
          Length = 5179

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 21/71 (29%), Positives = 30/71 (42%)
 Frame = +1

Query: 184  LAFLGP*SVNPDTCQ*VLDQRT*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETAT 363
            +AF     +N   C+ V    T T  TT+     T T + TT   +     T T   T T
Sbjct: 1863 MAFCLNYEINVQCCECVTQPTTMTTTTTENPTPPTTTPITTTTTVTPTPTPTGTQTPTTT 1922

Query: 364  NLSTTVHITWT 396
             ++TT  +T T
Sbjct: 1923 PITTTTTVTPT 1933


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,168,207
Number of Sequences: 237096
Number of extensions: 2961961
Number of successful extensions: 21374
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19074
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12214492840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)