Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_C06
(932 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 36 0.031
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 36 0.041
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 35 0.096
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 33 0.29
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 33 0.39
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 31 0.89
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 31 1.2
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 31 1.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 25 1.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 25 1.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 25 1.4
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 31 1.6
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 31 1.6
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 25 1.8
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 25 1.8
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 30 2.1
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 30 2.1
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 30 2.1
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 30 2.1
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 30 2.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 25 3.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 25 3.3
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 29 3.6
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 3.6
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 24 5.1
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 24 5.2
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 24 6.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 8.3
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 36.3 bits (80), Expect = 0.031
Identities = 24/70 (34%), Positives = 32/70 (45%)
Frame = +1
Query: 199 P*SVNPDTCQ*VLDQRT*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTT 378
P +V P TC T +PTT P TA + TT + P TT T ++TT
Sbjct: 195 PSTVAPVTCS------TMPMPTTQPLVTSTAPEVTTTVAQTTTAPIVTTANTTTQGVTTT 248
Query: 379 VHITWTVPKA 408
+T TV +A
Sbjct: 249 AGVTTTVTRA 258
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 35.9 bits (79), Expect = 0.041
Identities = 23/58 (39%), Positives = 27/58 (46%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 420
T T TT P + T T TT T+ P TTT ET T +TT T T P T+
Sbjct: 104 TTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTT-ETTTTPTTTTTETTTTPTTTTTT 160
Score = 35.9 bits (79), Expect = 0.041
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTT---VHITWTVPKADLT 417
T TVPTT T T TT T+ P TTT T T+ +TT T T K T
Sbjct: 213 TTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTT 272
Query: 418 SSLP 429
++ P
Sbjct: 273 TTTP 276
Score = 35.1 bits (77), Expect = 0.072
Identities = 26/91 (28%), Positives = 32/91 (35%)
Frame = +1
Query: 148 WPTLKFSSRTRILAFLGP*SVNPDTCQ*VLDQRT*TVPTTDPRGQETATNLLTTARTSLI 327
W K+ T I++ + T T T PTT T T TT T+
Sbjct: 41 WALCKYDPNTSIISPKWVKADCTTTSTTTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTT 100
Query: 328 LPKTTTLMETATNLSTTVHITWTVPKADLTS 420
P TTT T TT T T P T+
Sbjct: 101 TPTTTTETTTTPTTETTTTPTTTTPTTTTTT 131
Score = 35.1 bits (77), Expect = 0.072
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 423
T T PTT P T T TTA+T+ K+TT T ++T T T PK +S
Sbjct: 272 TTTTPTTTPTTTTTPTTTTTTAKTT----KSTTTTTKTTKTTSTPTTTTTTPKTPFDTS 326
Score = 32.7 bits (71), Expect = 0.39
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATNLLTTART-SLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 423
T T PTT T T TT T + P TTT T T +TT T T P T +
Sbjct: 91 TTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTET 150
Score = 32.3 bits (70), Expect = 0.51
Identities = 22/61 (36%), Positives = 26/61 (42%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 426
T T PTT T T TT T+ P TTT T T +TT T T T++
Sbjct: 116 TTTTPTTTTPTTTTTTPTTTTTETT-TTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTT 174
Query: 427 P 429
P
Sbjct: 175 P 175
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +1
Query: 247 T*TVPTTDPRGQETA-TNLLTTARTSLILPKTTTLM-ETATNLSTTVHITWTVPKADLTS 420
T T TT P TA T TT T+ P TTT + T T TT T T P T+
Sbjct: 181 TPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTT 240
Score = 31.9 bits (69), Expect = 0.67
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 426
T T PTT T T + TT T+ TTT T T + T T ++ T++
Sbjct: 199 TTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTT 258
Query: 427 P 429
P
Sbjct: 259 P 259
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHI-TWTVPKADLTSS 423
T T PTT T T TT T+ +P TTT T T +TT T T P T +
Sbjct: 192 TTTAPTTTTT---TPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPA 248
Query: 424 LPLS 435
S
Sbjct: 249 TTTS 252
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 423
T T PTT T + TT T+ +TTT T T TT T T P T++
Sbjct: 237 TTTTPTTTTTPATTTSETTTTTPTTTT--QTTTKPTTTTTTPTTTPTTTTTPTTTTTTA 293
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATN-LLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLT 417
T T PTT T T TT+ T+ P TTT +T T +TT T P T
Sbjct: 230 TTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTT--QTTTKPTTTTTTPTTTPTTTTT 285
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 286 TATNLLTTARTSLILPKTTTLMETATNLS-TTVHITWTVPKADLTSS 423
T T TT T+ P TTT T T + TT T T P + T++
Sbjct: 73 TTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTT 119
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/59 (32%), Positives = 23/59 (38%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 423
T T PTT T T TT T+ TTT T T +TT T T++
Sbjct: 121 TTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTT 179
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/59 (33%), Positives = 24/59 (40%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 423
T T TT P T TTA T+ TTT T T +T T T P T++
Sbjct: 174 TPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTT-TTTPTTTTTVPTTTTTTPTTTTTTT 231
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 34.7 bits (76), Expect = 0.096
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +1
Query: 256 VPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 402
+PTT ET T +T T+ + P TTT T T ++TT T P
Sbjct: 195 IPTTVTTTTETTTTPQSTTTTTTVPPTTTTSTTTTTTIATTTTSTSPAP 243
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 33.1 bits (72), Expect = 0.29
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHIT--WTVPKADLTS 420
T T TT T T TT T+ P TTT T T +TT+ T T P T+
Sbjct: 291 TTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTPTTTATT 350
Query: 421 SLP 429
+ P
Sbjct: 351 TKP 353
Score = 31.9 bits (69), Expect = 0.67
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLME---TATNLSTTVHITWTVPKADLT 417
T T PTT T T TT T+ TTT E T T +TT T T P T
Sbjct: 265 TTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTT 324
Query: 418 SS 423
+S
Sbjct: 325 AS 326
Score = 30.3 bits (65), Expect = 2.1
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Frame = +1
Query: 247 T*TVPTTDP-----RGQETATNLLTTARTSLILPKTTTLM-ETATNLSTTVHITWTVPKA 408
T T PTT P T T TT TS P TTT T T STT T T+
Sbjct: 279 TTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTT 338
Query: 409 DLTSS 423
T++
Sbjct: 339 TQTTT 343
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATNLLTTARTS-LILPKTTTLMETATNLSTTVHITWTVPKADLTSS 423
T T PTT T T TT T+ P TTT T T +T T + T++
Sbjct: 258 TTTKPTTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTT 317
Query: 424 LPLSLVLA 447
P + A
Sbjct: 318 APTTTTTA 325
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATNLLTTARTSLILPKT---TTLMETATNLSTTVHITWTVPKADLT 417
T T TT P TA TTA T+ T TT T T +TT T T P T
Sbjct: 304 TETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTPTTTATTTKPTTTTPTTTRT 363
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 32.7 bits (71), Expect = 0.39
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 253 TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHI---TWTVPKADLTSS 423
T TT T T+ + T T++++ TTT +TTV + T TVP + T++
Sbjct: 187 TTTTTTTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTVPTNETTTT 246
Query: 424 LPLS 435
PL+
Sbjct: 247 SPLN 250
Score = 29.9 bits (64), Expect = 2.7
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Frame = +1
Query: 136 LCWLWPTLKFSSRTRILAFLGP*SVNPDTCQ*VLDQRT*TVPTTDPRGQETATNLLTTAR 315
LC+LW L ++ T +N T +++ T TT P + T T L
Sbjct: 179 LCYLWVPLTTTTTTTTTTTTTTSPMNTTTTTVLING---TTTTTVPTNETTTTVPLNGTT 235
Query: 316 TSLILPKTTTLMETATNLSTTVHI---TWTVP-KADLTSS 423
T++ +TTT +TTV I T T+P ++TS+
Sbjct: 236 TTVPTNETTTTSPLNGTTTTTVPINGATTTIPSNGNITST 275
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 31.5 bits (68), Expect = 0.89
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 259 PTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS-SLPLS 435
P+T T T TT T+ P TTT T T +TT T T P T+ S PL+
Sbjct: 85 PSTTTTTTTTPTTTTTTPTTTTTTPTTTTT--TPTTTTTTPTTTTTTPTTTTTTRSTPLT 142
Query: 436 LV 441
V
Sbjct: 143 EV 144
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 31.5 bits (68), Expect = 0.89
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTT 378
T T TT P+ T T T A T+ P TTT T STT
Sbjct: 421 TTTTTTTTPKPTTTTTTTTTPAPTTTQKPTTTTTTPAPTTTSTT 464
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 262 TTDP-RGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 402
TT+P T T TT+ T+ P TTT T STT T T P
Sbjct: 55 TTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 402
T T TT T+T TT T TTT T T +T T T+P
Sbjct: 78 TPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMP 129
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = +1
Query: 259 PTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 423
PTT T T + TT + T T T STT T T P T++
Sbjct: 32 PTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTT 86
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/59 (37%), Positives = 25/59 (42%)
Frame = +1
Query: 247 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 423
T T TT P T T TT+ TS TTT T STT T T A T++
Sbjct: 71 TSTTTTTTPTTTTTTTPTTTTSTTS-----TTTTTTPTTTTSTTTTTTTTTTTATPTTT 124
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +1
Query: 157 LKFSSRTRILAFLGP*SVNPDTCQ*VLDQRT*TVPTTDPRGQETATNLLTTARTSLILPK 336
L ++ T +++ + +V T +T TT P+ T T +++ T++ K
Sbjct: 364 LPLTTTTEVISDVPTTTVQTSTTVPTTPSKTTATTTTTPKPTTTETATTSSSTTTVTTQK 423
Query: 337 TTTLMET----ATNLSTTVHITWTVPKADLTSS 423
TT+ T +T STT T + P + T++
Sbjct: 424 PTTVTSTTTLPSTTASTTTKTTTSTPTSPQTTT 456
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 256 VPTTDPRGQETA-TNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP-KADLTSSLP 429
VPTT + T T T T+ PK TT ETAT S+T +T P T++LP
Sbjct: 376 VPTTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 434
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 904 PXVGPVR*XGXXPPPPPPG 848
P + P+ G PPPPPPG
Sbjct: 717 PGLPPIT--GGPPPPPPPG 733
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -2
Query: 868 PPPPPPGXWXXXXGP 824
PPPPPPG + P
Sbjct: 772 PPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 904 PXVGPVR*XGXXPPPPPPG 848
P + P+ G PPPPPPG
Sbjct: 717 PGLPPIT--GGPPPPPPPG 733
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -2
Query: 868 PPPPPPGXWXXXXGP 824
PPPPPPG + P
Sbjct: 772 PPPPPPGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 904 PXVGPVR*XGXXPPPPPPG 848
P + P+ G PPPPPPG
Sbjct: 300 PGLPPIT--GGPPPPPPPG 316
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -2
Query: 868 PPPPPPGXWXXXXGP 824
PPPPPPG + P
Sbjct: 355 PPPPPPGGFKGGPPP 369
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 271 PRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 426
P ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 299 PLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 271 PRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 426
P ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 299 PLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +1
Query: 262 TTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 423
TT Q T T + TT RTS +P TTT + + T P D T +
Sbjct: 286 TTKTNPQITTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFSTTTRQPNFDKTKT 339
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +1
Query: 271 PRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 435
P ++ N+ TT I TTT M T T ST + T T P+ ++P S
Sbjct: 275 PEKKKEVFNVFTTKTNPQI---TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFS 326
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 25.0 bits (52), Expect(2) = 1.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 877 GXXPPPPPPG 848
G PPPPPPG
Sbjct: 796 GIIPPPPPPG 805
Score = 23.8 bits (49), Expect(2) = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 895 GPVR*XGXXPPPPPP 851
GPV G PPPPPP
Sbjct: 763 GPVG-VGVPPPPPPP 776
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 25.0 bits (52), Expect(2) = 1.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 877 GXXPPPPPPG 848
G PPPPPPG
Sbjct: 796 GIIPPPPPPG 805
Score = 23.8 bits (49), Expect(2) = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 895 GPVR*XGXXPPPPPP 851
GPV G PPPPPP
Sbjct: 763 GPVG-VGVPPPPPPP 776
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 262 TTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 423
TT R T + T ART+ P TTT + + T L TT+ + + D +S+
Sbjct: 378 TTATRTTAKITAVATVARTNTTQPPTTTPLSSTTALPTTLTSSSSTESTDGSST 431
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 262 TTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 420
T +P T T + +T+ T TTTL + + STT T TV + TS
Sbjct: 404 TEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Frame = +1
Query: 253 TVPTTDPRGQETATNLLTTARTSLILPKTT-------TLMETATNLSTTVHITWTVPKAD 411
+ P+T + T+T +TA TS TT T ++T LST++ T T
Sbjct: 312 STPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPEITS 371
Query: 412 LTSSLP 429
SSLP
Sbjct: 372 TLSSLP 377
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 262 TTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 420
T +P T T + +T+ T TTTL + + STT T TV + TS
Sbjct: 404 TEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Frame = +1
Query: 253 TVPTTDPRGQETATNLLTTARTSLILPKTT-------TLMETATNLSTTVHITWTVPKAD 411
+ P+T + T+T +TA TS TT T ++T LST++ T T
Sbjct: 312 STPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPEITS 371
Query: 412 LTSSLP 429
SSLP
Sbjct: 372 TLSSLP 377
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +1
Query: 253 TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 423
TVPTT T+T TT S TT T STT T P+ + T++
Sbjct: 281 TVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEPEPTTT 337
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +1
Query: 253 TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 423
TVPTT T+T TT S TT T STT T P+ + T++
Sbjct: 263 TVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEPEPTTT 319
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 262 TTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 423
+T+P T+T T+ +TTT + T+T+ +T T T P T++
Sbjct: 263 STEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTTTTTPTTTTTTT 316
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +1
Query: 253 TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADL 414
T PTT T T + TT ++ P TTT T T+ STT T P +
Sbjct: 299 TEPTTSTSTPTTTTTMQTTTPSTTSTP-TTTSTTTTTSASTTTISTTKPPTTQI 351
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 25.0 bits (52), Expect(2) = 3.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 877 GXXPPPPPPG 848
G PPPPPPG
Sbjct: 341 GGMPPPPPPG 350
Score = 23.0 bits (47), Expect(2) = 3.3
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -2
Query: 907 SPXVGPVR*XGXXPPPPPP 851
+P P G PPPPPP
Sbjct: 294 TPRPPPPPSSGMWPPPPPP 312
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 25.0 bits (52), Expect(2) = 3.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 877 GXXPPPPPPG 848
G PPPPPPG
Sbjct: 331 GGMPPPPPPG 340
Score = 23.0 bits (47), Expect(2) = 3.3
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -2
Query: 907 SPXVGPVR*XGXXPPPPPP 851
+P P G PPPPPP
Sbjct: 284 TPRPPPPPSSGMWPPPPPP 302
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 256 VPTTDPRGQETA-TNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP-KADLTSSLP 429
VPTT + T T T T+ PK TT ETAT S+T +T P T++LP
Sbjct: 495 VPTTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 553
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +1
Query: 253 TVPTTDPRGQETATNLLTTARTSLILPKTTTLMET--ATNLSTTVHITWTVPKADLTSS 423
T T P ETAT +T + P T T T +T STT T + P + T++
Sbjct: 517 TTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTTT 575
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 256 VPTTDPRGQETA-TNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP-KADLTSSLP 429
VPTT + T T T T+ PK TT ETAT S+T +T P T++LP
Sbjct: 336 VPTTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 394
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +1
Query: 253 TVPTTDPRGQETATNLLTTARTSLILPKTTTLMET--ATNLSTTVHITWTVPKADLTSS 423
T T P ETAT +T + P T T T +T STT T + P + T++
Sbjct: 358 TTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTTT 416
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 259 PTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 402
PTT + T TT+ T+ P+ TT + ++ T TWT P
Sbjct: 621 PTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKPVTLTTQ-TWTAP 667
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 259 PTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 402
PTT + T TT+ T+ P+ TT + ++ T TWT P
Sbjct: 621 PTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKPVTLTTQ-TWTAP 667
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 23.8 bits (49), Expect(2) = 5.1
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 904 PXVGPVR*XGXXPPPPPP 851
P + P+ PPPPPP
Sbjct: 798 PPLPPISSGAPPPPPPPP 815
Score = 23.4 bits (48), Expect(2) = 5.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 868 PPPPPPG 848
PPPPPPG
Sbjct: 811 PPPPPPG 817
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 23.8 bits (49), Expect(2) = 5.2
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 904 PXVGPVR*XGXXPPPPPP 851
P + P+ PPPPPP
Sbjct: 798 PPLPPISSGAPPPPPPPP 815
Score = 23.4 bits (48), Expect(2) = 5.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 868 PPPPPPG 848
PPPPPPG
Sbjct: 811 PPPPPPG 817
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = +1
Query: 256 VPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 435
+PTT + T T T T+ P TTT T T T T P T+ PL+
Sbjct: 321 IPTTTTTEEATTTTEEITTTTTKA-PTTTTTQSTTTTTQLPTTTTTTEPTTTTTTVDPLA 379
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 23.8 bits (49), Expect(2) = 6.7
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 904 PXVGPVR*XGXXPPPPPP 851
P + P+ PPPPPP
Sbjct: 493 PPLPPIATPSSVPPPPPP 510
Score = 23.0 bits (47), Expect(2) = 6.7
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -2
Query: 868 PPPPPPGXWXXXXGP 824
PPPPPP GP
Sbjct: 507 PPPPPPALEQEISGP 521
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 927 PXXXPPXPRXXGRFXXPXXXLPPPPP 850
P PP P +F P PPPPP
Sbjct: 42 PLPCPPPPICPPQFCPPPPMCPPPPP 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,828,657
Number of Sequences: 27780
Number of extensions: 400913
Number of successful extensions: 2335
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2046
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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