Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_C03
         (1283 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    29   7.1  

>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
            protein Y53C10A.10 protein.
          Length = 1582

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 18/83 (21%), Positives = 25/83 (30%)
 Frame = +2

Query: 1034 PGGPXXGGXXPXERAPRXQTGSSPRDWGXXPXGXXDXAXQXPNXKSPPHPRGXSLRXRXG 1213
            P GP   G  P   +P   + + P      P G        P+  + P P G +      
Sbjct: 1009 PNGPSPNGPSPNGPSPNGPSPNGPTPNWPSPNGPSPNGPNGPSDPNKPGPNGPNGPSDPN 1068

Query: 1214 KXAPHPTXPKPXXTXNGAXGXRG 1282
            K  P+           G  G  G
Sbjct: 1069 KPGPNGPNEPSDPNKPGPNGPNG 1091


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,566,142
Number of Sequences: 27780
Number of extensions: 198342
Number of successful extensions: 254
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 253
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3589453552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)