Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_C02
         (935 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0343 - 20437780-20438009,20438576-20438666                       31   1.7  
01_03_0175 + 13450869-13451013,13451293-13451372,13451417-134522...    30   2.3  
01_05_0769 - 25042022-25042447,25042856-25043234,25043714-250437...    29   4.0  
04_04_0111 - 22842337-22842648,22843008-22843402,22843732-228440...    29   5.3  
08_02_0604 - 19215017-19215101,19215870-19216021,19216591-192166...    29   7.0  
01_06_0231 + 27727110-27727206,27727315-27727447,27727491-277275...    29   7.0  
01_03_0108 - 12628711-12629178                                         29   7.0  

>05_04_0343 - 20437780-20438009,20438576-20438666
          Length = 106

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 142 KNSNSQGSNTSAANAIALGAMAVVAVGTFLFTWWKERKVPPPH 270
           K + S+G        + LG  AVV +  FLF +W+++K    H
Sbjct: 43  KKAQSKGHTGRTVLIVLLGIGAVVLLSFFLFKYWQKKKREEQH 85


>01_03_0175 +
           13450869-13451013,13451293-13451372,13451417-13452240,
           13452287-13452638
          Length = 466

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +2

Query: 209 LWRSEHFSLLGGKKGRFPHRTELKARIGEDSSRT 310
           LW  EHF L  G +   PHR    + IG DS+ T
Sbjct: 67  LWSIEHFGLRTGLRRPLPHRHLRVSDIGIDSTST 100


>01_05_0769 -
           25042022-25042447,25042856-25043234,25043714-25043763,
           25044222-25044442,25045085-25045385
          Length = 458

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 172 SAANAIALGAMAVVAVGTFLFTWWKERKVPPPHGAQG 282
           +AA A A+ A+  +AV T  + WW  R++     AQG
Sbjct: 14  AAAAAAAVAALLWLAVSTLEWAWWTPRRLERALRAQG 50


>04_04_0111 -
           22842337-22842648,22843008-22843402,22843732-22844073,
           22844154-22844282,22844402-22844514,22844596-22844667,
           22844783-22844859,22844978-22845052,22845058-22845121,
           22845332-22845403,22845496-22845628,22846859-22846961
          Length = 628

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +1

Query: 154 SQG-SNTSA-ANAIALGAMAVVAVGTFLFTWWKERKVPPPH 270
           SQG S T A A  +A  A  + AV    F WW+ RK P  H
Sbjct: 235 SQGDSKTGAIAGGVAAAAALLFAVPAIGFAWWRRRK-PEEH 274


>08_02_0604 -
           19215017-19215101,19215870-19216021,19216591-19216614,
           19216656-19216884,19217061-19217177,19219249-19219311,
           19219887-19220125
          Length = 302

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
 Frame = +1

Query: 181 NAIALGAM---AVVAVGTFLFTWWKERKVP 261
           N I +G++   A+V VG +LF W K R++P
Sbjct: 269 NDITIGSLLGTALVIVGLYLFLWAKAREIP 298


>01_06_0231 +
           27727110-27727206,27727315-27727447,27727491-27727553,
           27729069-27729140,27729640-27729783,27729868-27729990,
           27730102-27730157,27730249-27730635,27731176-27731366,
           27731498-27731630,27731715-27731869,27732188-27732379,
           27732490-27732750
          Length = 668

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 172 SAANAIALGAMAVVAVGTFLFTWWKERKVPPP 267
           ++ANA      +V + GT  F+ +KE KVPPP
Sbjct: 259 ASANAPVPAVASVPSTGTGSFSAFKEIKVPPP 290


>01_03_0108 - 12628711-12629178
          Length = 155

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -1

Query: 371 KHKRVHVSIILRTKLFFRCTMFCYYLRRFAP*APCGGGTFLSFH 240
           KHK+V ++++   K+    T     LR+  P A CG GTF++ H
Sbjct: 94  KHKKVKLAVLQFYKVD-DATGKVTRLRKECPNAECGAGTFMANH 136


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,206,607
Number of Sequences: 37544
Number of extensions: 219951
Number of successful extensions: 614
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)