Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_B24
(906 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 45 7e-05
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 45 7e-05
AL110500-3|CAB54483.1| 493|Caenorhabditis elegans Hypothetical ... 29 3.5
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 29 6.0
AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or cys... 29 6.0
U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein. 28 8.0
U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of... 28 8.0
AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical ... 28 8.0
AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical ... 28 8.0
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 45.2 bits (102), Expect = 7e-05
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Frame = +2
Query: 275 AGAQSKEEIREILGGGEAQES--SHTYGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF 448
A ++++EIR+ L G E H + + VAN I+ + + +
Sbjct: 52 AKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLY 111
Query: 449 -SRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVI 625
+ L+ + +NF + +A+ IN + E T+GHIK ++ D I + N
Sbjct: 112 LNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAF 171
Query: 626 FFQ 634
+F+
Sbjct: 172 YFK 174
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 45.2 bits (102), Expect = 7e-05
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Frame = +2
Query: 275 AGAQSKEEIREILGGGEAQES--SHTYGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF 448
A ++++EIR+ L G E H + + VAN I+ + + +
Sbjct: 52 AKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLY 111
Query: 449 -SRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVI 625
+ L+ + +NF + +A+ IN + E T+GHIK ++ D I + N
Sbjct: 112 LNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAF 171
Query: 626 FFQ 634
+F+
Sbjct: 172 YFK 174
>AL110500-3|CAB54483.1| 493|Caenorhabditis elegans Hypothetical
protein Y87G2A.3 protein.
Length = 493
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/100 (19%), Positives = 41/100 (41%)
Frame = +2
Query: 317 GGEAQESSHTYGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTANLFRSEVDNINF 496
GG + + G+ + DP + + + Y D+ + T ++ S ++ +
Sbjct: 304 GGRPNHALYFVGMSGSKLFYLDPHYCRPKTES-TAKMYAEKDSTATTDDVGFSHLEEL-V 361
Query: 497 SAPKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMF 616
P AD+ + D + + + +DP+ A+AMF
Sbjct: 362 PLPSQTADVYTKMDDSTYHCQMMLWIEYENVDPSLALAMF 401
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +2
Query: 464 LFRSEVDNINFSAPKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQ 634
L+ EV + + K IN+ E T GHIK ++ ID V + F+
Sbjct: 110 LYNCEVSSHDLDNEKETIKTINKLIRENTDGHIKKINTKISIDKDQVVVFLSAACFE 166
>AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 199
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +2
Query: 464 LFRSEVDNINFSAPKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQ 634
L+ EV + + K IN+ E T GHIK ++ ID V + F+
Sbjct: 109 LYNCEVSSHDLDNEKETIKTINKLIRENTDGHIKKINTKISIDKDQVVVFLSAACFE 165
>U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein.
Length = 449
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 649 TCQXPLEENDVKHCNGRGGVNFVFAHRSLYVSLSLFVRP-TVDDISGILR 503
TCQ P+E +D G++ VF R LY + F V+D + + R
Sbjct: 353 TCQVPIESSDYLVLLACDGISDVFNERDLYQLVEAFANDYPVEDYAELSR 402
>U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of xx
and xo animalsprotein 2 protein.
Length = 449
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 649 TCQXPLEENDVKHCNGRGGVNFVFAHRSLYVSLSLFVRP-TVDDISGILR 503
TCQ P+E +D G++ VF R LY + F V+D + + R
Sbjct: 353 TCQVPIESSDYLVLLACDGISDVFNERDLYQLVEAFANDYPVEDYAELSR 402
>AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical
protein C01B4.9 protein.
Length = 571
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = -1
Query: 609 ATAVAGSILSSLTGVFMCP*VCSSAQRLMISAAFFGALKLMLSTSLLNRFAVLENASANL 430
+T+VAG+++S LTG + +S+ FG + ++ S+L A L + A+
Sbjct: 80 STSVAGAVISILTGCYYLAGPLASS-----FVNVFGIRSVAIAGSILATTAFLLSRFAST 134
Query: 429 YWSETYILLATVKNFG 382
W E Y+L + G
Sbjct: 135 IW-ELYLLFGVLGGIG 149
>AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical
protein Y19D10A.12 protein.
Length = 544
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = -1
Query: 609 ATAVAGSILSSLTGVFMCP*VCSSAQRLMISAAFFGALKLMLSTSLLNRFAVLENASANL 430
+T+VAG+++S LTG + +S+ FG + ++ S+L A L + A+
Sbjct: 80 STSVAGAVISILTGCYYLAGPLASS-----FVNVFGIRSVAIAGSILATTAFLLSRFAST 134
Query: 429 YWSETYILLATVKNFG 382
W E Y+L + G
Sbjct: 135 IW-ELYLLFGVLGGIG 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,990,129
Number of Sequences: 27780
Number of extensions: 419737
Number of successful extensions: 1063
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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