Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_B17
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.6  
01_06_0826 - 32252546-32253208                                         30   2.8  
02_05_1225 + 35060642-35060815,35061254-35061802,35062284-350623...    29   5.0  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  
02_05_0965 + 33136373-33136512,33136595-33136688,33136845-331368...    28   8.7  
02_05_0197 - 26641356-26642188,26642312-26642398,26643373-266434...    28   8.7  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +2

Query: 512 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 670
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>01_06_0826 - 32252546-32253208
          Length = 220

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +3

Query: 576 EVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPSGSVALSHSS 722
           EV+KP R +   G     LP  L+C    A  +    SP+G  A S SS
Sbjct: 5   EVSKPSRRLSPKGSFKLSLPSLLACGQCKATAVSPPESPTGVGARSFSS 53


>02_05_1225 +
           35060642-35060815,35061254-35061802,35062284-35062348,
           35062417-35062957,35063321-35064610
          Length = 872

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 10/59 (16%)
 Frame = -1

Query: 809 KAQRSAERGFVHTAQLGANDLHRTE----------IPTA*AMRKRHASRRRKADRYPVS 663
           ++ R++ERG  H + LG  +LH T+           P A +   R +S+RR+A + P S
Sbjct: 679 RSARTSERGQHHLSNLGMLNLHATDNVPRNLSLGGFPVASSPYGRSSSKRRRASKLPKS 737


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +2

Query: 344 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 499
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 293 NESAN---ARGEAVCVLGALPLPRSLTRCAR 376
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>02_05_0965 +
           33136373-33136512,33136595-33136688,33136845-33136889,
           33137007-33137174,33137247-33137331,33137531-33137637,
           33137918-33137998,33138232-33138284,33138361-33138460,
           33138911-33139054,33139268-33139364,33139528-33139611,
           33139904-33140123,33140204-33140297,33140406-33140975,
           33141348-33141449,33141564-33141656,33141834-33141836
          Length = 759

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = -2

Query: 853 KSXLPGWTQDDSYRIRRSGRLNGGSCTQPSLERTTYTELRYLQREL*E 710
           K  LPG++  +SYR+   G   GG   QP+L      +LR L REL E
Sbjct: 40  KPTLPGFSGAESYRMPSCGLAGGGE--QPALPP---DQLRSLYRELSE 82


>02_05_0197 - 26641356-26642188,26642312-26642398,26643373-26643452,
            26643948-26644120,26644227-26644308,26644623-26644758,
            26644777-26644833,26644905-26645120,26645939-26646335,
            26646458-26646544,26647063-26647324,26648892-26648972,
            26649176-26650350
          Length = 1221

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 717  YEKAPRFPKEKGGQVSGKRQGRNR 646
            ++  PRFP ++GG   G+RQG+ +
Sbjct: 1137 HQNLPRFPPQQGGGNIGERQGQGQ 1160


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,252,542
Number of Sequences: 37544
Number of extensions: 544329
Number of successful extensions: 1639
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1639
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)