Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_B15
(921 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY307930-1|AAQ73824.1| 340|Homo sapiens intestinal mucin MUC3A ... 33 1.9
AL590551-1|CAH71650.1| 600|Homo sapiens fibronectin type III do... 32 3.4
U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein. 31 4.5
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 31 4.5
BC068505-1|AAH68505.1| 644|Homo sapiens zinc finger protein 746... 31 4.5
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 31 4.5
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 31 4.5
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 31 4.5
AK128244-1|BAC87351.1| 459|Homo sapiens protein ( Homo sapiens ... 31 4.5
AK055975-1|BAB71061.1| 242|Homo sapiens protein ( Homo sapiens ... 31 4.5
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 31 4.5
>AY307930-1|AAQ73824.1| 340|Homo sapiens intestinal mucin MUC3A
precursor protein.
Length = 340
Score = 32.7 bits (71), Expect = 1.9
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +3
Query: 147 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTS 326
T +TPL T + T + TT +T++ + T T+TN T++ T + P A T
Sbjct: 226 TERTPLPTGSIHTTTSPTPVFTTLKTAVTSTSSITSSITSTNTVTSMTTTASQPTATNTL 285
Query: 327 SLPLSLVLA 353
S P +L+
Sbjct: 286 SSPTRTILS 294
>AL590551-1|CAH71650.1| 600|Homo sapiens fibronectin type III
domain containing 1 protein.
Length = 600
Score = 31.9 bits (69), Expect = 3.4
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +3
Query: 147 TLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 308
T TPL TP TAT TT + TT + T T +TT T T P
Sbjct: 161 TTTTPLPTTTTPRPTTATTRRTTTTRRTTTRRPTTTVRTTTRTTTTTTPTPTTP 214
>U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein.
Length = 358
Score = 31.5 bits (68), Expect = 4.5
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +2
Query: 143 ANAQDPVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 310
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 157 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 212
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 4.5
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +2
Query: 143 ANAQDPVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 310
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 319
>BC068505-1|AAH68505.1| 644|Homo sapiens zinc finger protein 746
protein.
Length = 644
Score = 31.5 bits (68), Expect = 4.5
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 251 PNGNGYEPIDNGAYYVDPPQG-RPYFKPTPFPGARGG 358
P G Y DNG +DP Q RP+ +P +PG G
Sbjct: 397 PEGLPYSSPDNGEAILDPSQAPRPFNEPCKYPGRTKG 433
>BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein.
Length = 407
Score = 31.5 bits (68), Expect = 4.5
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +2
Query: 143 ANAQDPVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 310
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 206 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 261
>AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 4.5
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +2
Query: 143 ANAQDPVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 310
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 319
>AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 4.5
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +2
Query: 143 ANAQDPVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 310
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 319
>AK128244-1|BAC87351.1| 459|Homo sapiens protein ( Homo sapiens
cDNA FLJ46378 fis, clone TESTI4052775. ).
Length = 459
Score = 31.5 bits (68), Expect = 4.5
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 251 PNGNGYEPIDNGAYYVDPPQG-RPYFKPTPFPGARGG 358
P G Y DNG +DP Q RP+ +P +PG G
Sbjct: 212 PEGLPYSSPDNGEAILDPSQAPRPFNEPCKYPGRTKG 248
>AK055975-1|BAB71061.1| 242|Homo sapiens protein ( Homo sapiens
cDNA FLJ31413 fis, clone NT2NE2000259, moderately
similar to OOCYTE ZINC FINGER PROTEIN XLCOF6.1. ).
Length = 242
Score = 31.5 bits (68), Expect = 4.5
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 251 PNGNGYEPIDNGAYYVDPPQG-RPYFKPTPFPGARGG 358
P G Y DNG +DP Q RP+ +P +PG G
Sbjct: 43 PEGLPYSSPDNGEAILDPSQAPRPFNEPCKYPGRTKG 79
>AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat
containing 4 variant protein.
Length = 441
Score = 31.5 bits (68), Expect = 4.5
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +2
Query: 143 ANAQDPVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 310
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 240 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 295
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,477,821
Number of Sequences: 237096
Number of extensions: 1530775
Number of successful extensions: 10771
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10759
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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