Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_B08
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0167 + 11401984-11402023,11402024-11402293,11402499-114026...    31   1.2  
02_05_0686 - 30900748-30902167,30903442-30904742                       31   1.6  
02_04_0400 - 22608519-22608844,22609044-22609122                       30   2.8  

>10_06_0167 +
           11401984-11402023,11402024-11402293,11402499-11402632,
           11402737-11403663
          Length = 456

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 538 GGGGXFXPPXGGXFFSPXKGGXXXKKNFFKXXP 636
           G GG   PP G   + P KG    K+NF K  P
Sbjct: 367 GNGGLCGPPLGKNCYVPQKGHMRRKENFSKIQP 399


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/51 (35%), Positives = 19/51 (37%)
 Frame = +3

Query: 720 PXXGGGAXPXXKKKXXXXPXKXPPXLLFXXPXXKKKXPPPSPXEXGASFXP 872
           P  G    P  K      P K P       P  KK  PPP P + GAS  P
Sbjct: 340 PPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390



 Score = 29.5 bits (63), Expect = 3.7
 Identities = 17/45 (37%), Positives = 17/45 (37%)
 Frame = +3

Query: 744 PXXKKKXXXXPXKXPPXLLFXXPXXKKKXPPPSPXEXGASFXPPP 878
           P  K      P K PP      P    K PPP P   G S  PPP
Sbjct: 330 PPPKAAPPPPPPKGPP------PPPPAKGPPPPPPPKGPSPPPPP 368



 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/53 (32%), Positives = 17/53 (32%)
 Frame = +3

Query: 720 PXXGGGAXPXXKKKXXXXPXKXPPXLLFXXPXXKKKXPPPSPXEXGASFXPPP 878
           P       P  K      P K PP      P  K   PPP P   G    PPP
Sbjct: 331 PPKAAPPPPPPKGPPPPPPAKGPPP----PPPPKGPSPPPPPPPGGKKGGPPP 379


>02_04_0400 - 22608519-22608844,22609044-22609122
          Length = 134

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 532 GXGGGGXFXPPXGGXFFSPXKG 597
           G GGGG + PP  G ++ P  G
Sbjct: 86  GGGGGGGYYPPWNGGYYPPGPG 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,440,767
Number of Sequences: 37544
Number of extensions: 215278
Number of successful extensions: 846
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)