Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_B06
(906 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0472 - 24655384-24655764,24655904-24656119,24656197-246563... 32 0.72
03_02_0896 - 12233706-12233801,12234005-12234181,12234741-122348... 31 0.95
07_01_0007 - 47999-48379,48496-48711,48794-48918,49031-49220,494... 31 1.7
11_06_0423 + 23349588-23350084,23350133-23350346 30 2.9
06_01_0280 - 2056449-2056487,2056613-2056930,2057025-2057171,205... 30 2.9
03_05_1019 + 29736644-29736709,29737156-29737515,29737595-297377... 30 2.9
06_01_0303 + 2194345-2194414,2195228-2195328,2195818-2196657,219... 29 3.8
06_01_0278 - 2042574-2042612,2042738-2043055,2043150-2043296,204... 29 3.8
07_03_1107 - 24024387-24024497,24025799-24026410 28 8.9
>03_05_0472 -
24655384-24655764,24655904-24656119,24656197-24656321,
24656432-24656621,24656817-24656911,24657230-24657454,
24657940-24658003
Length = 431
Score = 31.9 bits (69), Expect = 0.72
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = +1
Query: 670 MPGFLDDSIYSGTLNLFSGCTSSAEACIKQASGADILPPIVSGRITSIGFAFTYGTVEIR 849
+PG D I++ T+ + + + A I PP+V ++ F FT G++ +
Sbjct: 202 IPGSHSDRIFT-TIGAVANLVFAYNTGMLPEIQATIRPPVVKNMEKALWFQFTVGSLPLY 260
Query: 850 AKLPQGDWLYRKSIGAVL 903
A G W Y S + L
Sbjct: 261 AVTFMGYWAYGSSTSSYL 278
>03_02_0896 -
12233706-12233801,12234005-12234181,12234741-12234854,
12234928-12235006,12235372-12235533,12235957-12236079,
12236139-12236218
Length = 276
Score = 31.5 bits (68), Expect = 0.95
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 649 NAKLQQHMPGFLDDSIYSGTLNLFSGCTSSAEACIKQASGADI 777
N K+ Q +PG +Y G+L+ GCT E K + G DI
Sbjct: 74 NEKMAQSVPGI---KVYGGSLDNVKGCTDQVENGTKLSLGKDI 113
>07_01_0007 -
47999-48379,48496-48711,48794-48918,49031-49220,
49465-49559,49807-49954
Length = 384
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 769 ADILPPIVSGRITSIGFAFTYGTVEIRAKLPQGDWLYRKSIGAVL 903
A I PP+V ++ F FT G++ + A G W Y S + L
Sbjct: 187 ATIRPPVVKNMEKALWFQFTVGSLPLYAVTFMGYWAYGSSTSSYL 231
>11_06_0423 + 23349588-23350084,23350133-23350346
Length = 236
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +1
Query: 376 EKTNQQFTITELEDPNASTDSQKPECKPTKTRVRGGKACAGQTIFEEQFDSLDENVWQI 552
E Q IT E+ A DS +P C ++ + AG++ E D LDE + I
Sbjct: 11 ESQFNQCAITAEEEAAALPDSTEPPCTNVASQDEESGSAAGESESESDSDDLDEVIADI 69
>06_01_0280 -
2056449-2056487,2056613-2056930,2057025-2057171,
2057273-2058112,2059044-2059117,2059515-2059647,
2059804-2059941
Length = 562
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/86 (24%), Positives = 40/86 (46%)
Frame = +1
Query: 40 IXLTKMAAAMCGRVLCLILFIKISYAQMPDVKIQAFRPKGLRISVQDVPKMTLFAFQGNL 219
+ L ++ C R++CL K+ + ++ F L++ + P +++FAFQG+
Sbjct: 294 LALEQLEIRYCNRIVCL----KVPCLLQRLISLKVFGCDKLKLIENEAPNVSMFAFQGD- 348
Query: 220 NHKLDSTSVGTLSAEVLDPVNGRWVY 297
K + TL + L V +VY
Sbjct: 349 --KTELKLGETLQIKSLCMVRSGYVY 372
>03_05_1019 +
29736644-29736709,29737156-29737515,29737595-29737735,
29737912-29738044,29738344-29738457,29738553-29738701,
29740815-29740907,29741019-29741079,29741180-29741512,
29742149-29742224,29742322-29742421,29743300-29743369,
29743987-29744082,29744355-29744402,29744427-29744658,
29745186-29745246,29745265-29745375
Length = 747
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +2
Query: 623 LPQMETYILTPNFNNICPAFWTTLYILAHLICSVGVLRQQKHASNRLPVLIF 778
L Q+E +L PN+N + P+ T L + C+ R + + ++ + F
Sbjct: 654 LQQLEAVVLVPNYNRLMPSGRTFLNFFNNANCAAAAKRSRFKGATKMGITDF 705
>06_01_0303 +
2194345-2194414,2195228-2195328,2195818-2196657,
2196743-2196889,2196985-2197365
Length = 512
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +1
Query: 40 IXLTKMAAAMCGRVLCLILFIKISYAQMPDVKIQAFRPKGLRISVQDVPKMTLFAFQGN 216
+ L ++ C R++CL K+ + ++ F L++ + P +++FAFQG+
Sbjct: 236 LALEQLEIRYCDRIVCL----KVPCLLQRLISLKVFGCDNLKLIENEAPNVSIFAFQGD 290
>06_01_0278 -
2042574-2042612,2042738-2043055,2043150-2043296,
2043382-2044221,2045182-2045282,2045666-2045791,
2047124-2047214
Length = 553
Score = 29.5 bits (63), Expect = 3.8
Identities = 21/86 (24%), Positives = 40/86 (46%)
Frame = +1
Query: 40 IXLTKMAAAMCGRVLCLILFIKISYAQMPDVKIQAFRPKGLRISVQDVPKMTLFAFQGNL 219
+ L ++ C R++CL K+ + ++ F L++ + P +++FAFQG+
Sbjct: 285 LALEQLEIRYCDRIVCL----KVPCLLQRLISLKVFGCDKLKLIENEAPNVSIFAFQGD- 339
Query: 220 NHKLDSTSVGTLSAEVLDPVNGRWVY 297
K + TL + L V +VY
Sbjct: 340 --KTELKLGETLQIKSLCMVRSGYVY 363
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -2
Query: 557 CSICQTFSSRES---NCSSNIVCPAHALPPRTL 468
C IC FSSR + +CS ++ +H L RTL
Sbjct: 206 CPICDVFSSRCAAYLDCSCSVTALSHRLKTRTL 238
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,762,711
Number of Sequences: 37544
Number of extensions: 503005
Number of successful extensions: 1523
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1523
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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