Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_B06
(906 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z81513-6|CAB04176.1| 341|Caenorhabditis elegans Hypothetical pr... 31 1.1
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 30 2.0
Z78414-1|CAB01669.2| 472|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical pr... 29 4.6
U21321-6|AAG00046.1| 206|Caenorhabditis elegans Hypothetical pr... 29 4.6
U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm recept... 29 6.0
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 29 6.0
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 29 6.0
AF024498-4|AAF39805.2| 319|Caenorhabditis elegans Serpentine re... 29 6.0
Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z84574-1|CAE54890.1| 577|Caenorhabditis elegans Hypothetical pr... 28 8.0
U40942-6|AAP68937.1| 709|Caenorhabditis elegans High temperatur... 28 8.0
U40942-5|AAC47068.1| 729|Caenorhabditis elegans High temperatur... 28 8.0
AY070228-1|AAL55425.1| 729|Caenorhabditis elegans HID-1 protein. 28 8.0
AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical ... 28 8.0
AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 33.1 bits (72), Expect = 0.28
Identities = 30/84 (35%), Positives = 40/84 (47%)
Frame = +2
Query: 494 PDRQYSRSNLIPWTKTFGKSSSIYRFITPNTPSYPTSVII*QYLPQMETYILTPNFNNIC 673
P SR + PW + F + SSIY + T TP +PT + Y P ET P N
Sbjct: 359 PTPTQSRITVEPWIERFTEKSSIYEYST--TP-HPTLI----YEPHGET---LPTLN--- 405
Query: 674 PAFWTTLYILAHLICSVGVLRQQK 745
P TT I+ H+ S+ +QQK
Sbjct: 406 PPTTTTPSIVDHVFSSLMNTQQQK 429
>Z81513-6|CAB04176.1| 341|Caenorhabditis elegans Hypothetical
protein F26D2.7 protein.
Length = 341
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 557 SIYRFIT-PNTPSYPTSVII*QYLPQMETYILTPNFNNICPAFWTTLYILAHLICSVGV 730
S+ FI P T +Y +VI L + +IL+ NF +I +FW T Y+L +I VGV
Sbjct: 55 SVSEFIARPFTLNYNRAVI----LFSINDWILSKNFLSIALSFWITFYLL--IISLVGV 107
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 544 WQIEQYIPIYHPEYPFVSYQRNNLTVSTADGNLHINAKLQQHMPGFLD 687
WQ + I YH FV RN + + ++ + + L++H PG+LD
Sbjct: 2865 WQTSEDIK-YH--ITFVIVDRNGVVIEESEARQTLTSFLKKHRPGYLD 2909
>Z78414-1|CAB01669.2| 472|Caenorhabditis elegans Hypothetical
protein W09D12.1 protein.
Length = 472
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 583 YPFVSYQRNNLTVSTADGNLHINAKLQQHMPGFLDD 690
YP ++ NN +V GN+ +QQ+ P FL+D
Sbjct: 380 YPQGAFPLNNGSVILLSGNVFATYNVQQNAPSFLND 415
>Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical protein
F57C7.4 protein.
Length = 1484
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 244 VGTLSAEVLDPVNGRWVYEEPDLKLKVKDVVYYNAVF 354
V +S +L P NG+++Y + K + YYN +F
Sbjct: 1133 VDPISGTILTPSNGQFLYSVDIAVMNYKPINYYNILF 1169
>U21321-6|AAG00046.1| 206|Caenorhabditis elegans Hypothetical
protein ZK177.3 protein.
Length = 206
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 899 TAPIDFRYSQSPCGNFALISTVPYVNANPIDVILP 795
+ PI++ YSQ+P + + PY N +P + LP
Sbjct: 157 STPIEYPYSQNPYQDHTPFDSYPYPNFHPQQLPLP 191
>U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm receptor
protein 138 protein.
Length = 328
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -2
Query: 281 LTGSSTSALSVPTLVLSSLWFKLPWNANSVILGTS*TDIRSPFGRK 144
L GS L VPT++L +W+ S++LG S TD + + RK
Sbjct: 122 LNGSKLCLLFVPTIILFFVWY------FSLLLGMSNTDDKVEYSRK 161
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 742 EACIKQASGADILPPIVSGRITSIGFAFTYGTVEIRAK 855
+ CI +AS D + + SGR + F GTV++R +
Sbjct: 265 DRCISEASHIDGVLELKSGRFWQLDFNSLVGTVDVRVR 302
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 742 EACIKQASGADILPPIVSGRITSIGFAFTYGTVEIRAK 855
+ CI +AS D + + SGR + F GTV++R +
Sbjct: 283 DRCISEASHIDGVLELKSGRFWQLDFNSLVGTVDVRVR 320
>AF024498-4|AAF39805.2| 319|Caenorhabditis elegans Serpentine
receptor, class x protein102 protein.
Length = 319
Score = 28.7 bits (61), Expect = 6.0
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +2
Query: 548 KSSSIYRFITPNTPSYPTSVII*QYLPQMETYILTPNFNNICPAFWTTLY--ILAHLICS 721
K SS Y + T S I+ Y+ + NFN P F TL +L++ I
Sbjct: 56 KMSSFYLMCSSKTLS--NMCILLGYVVHNAPITIMNNFNG--PTFMNTLVNEMLSYGIYI 111
Query: 722 VGVLRQQKHASNRLPVLIFYHQS 790
VG + Q + NRL ++IF QS
Sbjct: 112 VGPIIQFMISINRLMIIIFVKQS 134
>Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -1
Query: 585 VFGVINRYILLDLPNVFVQGIKLLLEYCLS---GTRFAASHSRLCWLTF 448
+FGV + L +P +G+ LL++ CLS R + SH R W F
Sbjct: 330 IFGVGTNILSLPMPEEAPKGLVLLIKQCLSQKGRNRPSFSHIRQHWEIF 378
>Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -1
Query: 585 VFGVINRYILLDLPNVFVQGIKLLLEYCLS---GTRFAASHSRLCWLTF 448
+FGV + L +P +G+ LL++ CLS R + SH R W F
Sbjct: 330 IFGVGTNILSLPMPEEAPKGLVLLIKQCLSQKGRNRPSFSHIRQHWEIF 378
>Z84574-1|CAE54890.1| 577|Caenorhabditis elegans Hypothetical
protein F33E2.2c protein.
Length = 577
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -1
Query: 585 VFGVINRYILLDLPNVFVQGIKLLLEYCLS---GTRFAASHSRLCWLTF 448
+FGV + L +P +G+ LL++ CLS R + SH R W F
Sbjct: 330 IFGVGTNILSLPMPEEAPKGLVLLIKQCLSQKGRNRPSFSHIRQHWEIF 378
>U40942-6|AAP68937.1| 709|Caenorhabditis elegans High
temperature-induced dauerformation protein 1, isoform b
protein.
Length = 709
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 842 STVPYVNA-NPIDVILPLTIGGRISAPEACLMHASADEVHPLNKLSVPEYI 693
S +P+ +A P+ +L T+ + PE + HA+ ++ L+ + EYI
Sbjct: 113 SPIPHGDAAKPLAAVLLETLSDLLFCPEFTITHANGQKIDDLSTIDSCEYI 163
>U40942-5|AAC47068.1| 729|Caenorhabditis elegans High
temperature-induced dauerformation protein 1, isoform a
protein.
Length = 729
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 842 STVPYVNA-NPIDVILPLTIGGRISAPEACLMHASADEVHPLNKLSVPEYI 693
S +P+ +A P+ +L T+ + PE + HA+ ++ L+ + EYI
Sbjct: 113 SPIPHGDAAKPLAAVLLETLSDLLFCPEFTITHANGQKIDDLSTIDSCEYI 163
>AY070228-1|AAL55425.1| 729|Caenorhabditis elegans HID-1 protein.
Length = 729
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 842 STVPYVNA-NPIDVILPLTIGGRISAPEACLMHASADEVHPLNKLSVPEYI 693
S +P+ +A P+ +L T+ + PE + HA+ ++ L+ + EYI
Sbjct: 113 SPIPHGDAAKPLAAVLLETLSDLLFCPEFTITHANGQKIDDLSTIDSCEYI 163
>AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -1
Query: 585 VFGVINRYILLDLPNVFVQGIKLLLEYCLS---GTRFAASHSRLCWLTF 448
+FGV + L +P +G+ LL++ CLS R + SH R W F
Sbjct: 330 IFGVGTNILSLPMPEEAPKGLVLLIKQCLSQKGRNRPSFSHIRQHWEIF 378
>AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -1
Query: 585 VFGVINRYILLDLPNVFVQGIKLLLEYCLS---GTRFAASHSRLCWLTF 448
+FGV + L +P +G+ LL++ CLS R + SH R W F
Sbjct: 330 IFGVGTNILSLPMPEEAPKGLVLLIKQCLSQKGRNRPSFSHIRQHWEIF 378
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,657,171
Number of Sequences: 27780
Number of extensions: 457501
Number of successful extensions: 1496
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1490
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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