Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_B01
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    31   0.82 
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    31   0.82 
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    31   0.82 
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z83241-3|CAB05818.1|  422|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z81120-9|CAB03349.1|  422|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z82095-2|CAB05027.2|  602|Caenorhabditis elegans Hypothetical pr...    29   3.3  

>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = +1

Query: 787 GGXPPPRGXXLXPGXXPPXEPPXGPP 864
           GG PPP G     G  PP  PP G P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLP 736


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = +1

Query: 787 GGXPPPRGXXLXPGXXPPXEPPXGPP 864
           GG PPP G     G  PP  PP G P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLP 736


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = +1

Query: 787 GGXPPPRGXXLXPGXXPPXEPPXGPP 864
           GG PPP G     G  PP  PP G P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLP 319


>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
           protein C01G8.9a protein.
          Length = 1724

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +1

Query: 790 GXPPPRGXXLXPGXXPPXEPPXGPP 864
           G PPP      PG   P  PP GPP
Sbjct: 444 GAPPPGPPGAYPGNGAPGGPPGGPP 468


>Z83241-3|CAB05818.1|  422|Caenorhabditis elegans Hypothetical
           protein T12D8.8 protein.
          Length = 422

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = -3

Query: 865 GGAPXGVPX-GGXPRGXKXYPXGGAPXXXXRG 773
           GG P G P  GG P G    P GGAP     G
Sbjct: 288 GGMPGGFPGAGGMPGGFPGAPGGGAPGGMGAG 319


>Z81120-9|CAB03349.1|  422|Caenorhabditis elegans Hypothetical
           protein T12D8.8 protein.
          Length = 422

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = -3

Query: 865 GGAPXGVPX-GGXPRGXKXYPXGGAPXXXXRG 773
           GG P G P  GG P G    P GGAP     G
Sbjct: 288 GGMPGGFPGAGGMPGGFPGAPGGGAPGGMGAG 319


>Z82095-2|CAB05027.2|  602|Caenorhabditis elegans Hypothetical
           protein ZK849.4 protein.
          Length = 602

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +1

Query: 787 GGXPPPRGXXLXPGXXPPXEPPXGPP 864
           G  PPP    L P    P EPP  PP
Sbjct: 480 GARPPPSPPALPPALPNPNEPPPPPP 505


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.315    0.151    0.516 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,561,397
Number of Sequences: 27780
Number of extensions: 137937
Number of successful extensions: 451
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)