Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_A13
         (831 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z18284-1|CAA79158.1|  398|Homo sapiens Oct-6 transcription facto...    33   0.96 
L26494-1|AAA59965.1|  448|Homo sapiens oct-6 protein.                  33   0.96 
AL139158-1|CAI23136.1|  451|Homo sapiens POU domain, class 3, tr...    33   0.96 
BC114928-1|AAI14929.1|  562|Homo sapiens TMPRSS13 protein protein.     33   1.3  
AY190317-1|AAO38062.1|  558|Homo sapiens transmembrane protease ...    33   1.3  
AB048796-1|BAB39741.2|  581|Homo sapiens membrane-type mosaic se...    33   1.3  
AK027798-1|BAB55376.1|  491|Homo sapiens protein ( Homo sapiens ...    32   2.2  
AB209711-1|BAD92948.1|  380|Homo sapiens RAB40B, member RAS onco...    32   2.9  

>Z18284-1|CAA79158.1|  398|Homo sapiens Oct-6 transcription factor
           protein.
          Length = 398

 Score = 33.5 bits (73), Expect = 0.96
 Identities = 35/128 (27%), Positives = 46/128 (35%), Gaps = 9/128 (7%)
 Frame = -1

Query: 564 HVVHSAAQRVEVGRVGNGAGRVPDRERL---GAXXXXXXXXXVDLA--CDAELLPEAGNA 400
           H+ H  A     GR  +G G      RL   GA            A      + P  G +
Sbjct: 36  HLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGAS 95

Query: 399 GPGQAQPVPVYVVQSEPCGGSAELVAVVEVGG---PDGAEHVLVVAG-ERDLQGGPGGSV 232
           G  Q QP+ +Y   + P GG   L  ++  GG     G  H L   G E  L+  P   +
Sbjct: 96  GGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHL 155

Query: 231 RVHCEAAG 208
             H  A G
Sbjct: 156 GAHGHAHG 163


>L26494-1|AAA59965.1|  448|Homo sapiens oct-6 protein.
          Length = 448

 Score = 33.5 bits (73), Expect = 0.96
 Identities = 35/128 (27%), Positives = 46/128 (35%), Gaps = 9/128 (7%)
 Frame = -1

Query: 564 HVVHSAAQRVEVGRVGNGAGRVPDRERL---GAXXXXXXXXXVDLA--CDAELLPEAGNA 400
           H+ H  A     GR  +G G      RL   GA            A      + P  G +
Sbjct: 86  HLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGAS 145

Query: 399 GPGQAQPVPVYVVQSEPCGGSAELVAVVEVGG---PDGAEHVLVVAG-ERDLQGGPGGSV 232
           G  Q QP+ +Y   + P GG   L  ++  GG     G  H L   G E  L+  P   +
Sbjct: 146 GGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHL 205

Query: 231 RVHCEAAG 208
             H  A G
Sbjct: 206 GAHGHAHG 213


>AL139158-1|CAI23136.1|  451|Homo sapiens POU domain, class 3,
           transcription factor 1 protein.
          Length = 451

 Score = 33.5 bits (73), Expect = 0.96
 Identities = 35/128 (27%), Positives = 46/128 (35%), Gaps = 9/128 (7%)
 Frame = -1

Query: 564 HVVHSAAQRVEVGRVGNGAGRVPDRERL---GAXXXXXXXXXVDLA--CDAELLPEAGNA 400
           H+ H  A     GR  +G G      RL   GA            A      + P  G +
Sbjct: 89  HLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGAS 148

Query: 399 GPGQAQPVPVYVVQSEPCGGSAELVAVVEVGG---PDGAEHVLVVAG-ERDLQGGPGGSV 232
           G  Q QP+ +Y   + P GG   L  ++  GG     G  H L   G E  L+  P   +
Sbjct: 149 GGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHL 208

Query: 231 RVHCEAAG 208
             H  A G
Sbjct: 209 GAHGHAHG 216


>BC114928-1|AAI14929.1|  562|Homo sapiens TMPRSS13 protein protein.
          Length = 562

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
 Frame = -2

Query: 434 ATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPV 267
           A+P+ +P PG   P R SP   + +RASPA A+LS   S +S+   + S   S      V
Sbjct: 59  ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLV 117

Query: 266 RGTFRAAPEVPSEFTVKLPA--CLRARVGTCLP 174
           R T   A  + S      PA    R   GT LP
Sbjct: 118 RATPVGAVPIRSSPARSAPATRATRESPGTSLP 150


>AY190317-1|AAO38062.1|  558|Homo sapiens transmembrane protease
           serine 6 protein.
          Length = 558

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
 Frame = -2

Query: 434 ATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPV 267
           A+P+ +P PG   P R SP   + +RASPA A+LS   S +S+   + S   S      V
Sbjct: 59  ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLV 117

Query: 266 RGTFRAAPEVPSEFTVKLPA--CLRARVGTCLP 174
           R T   A  + S      PA    R   GT LP
Sbjct: 118 RATPVGAVPIRSSPARSAPATRATRESPGTSLP 150


>AB048796-1|BAB39741.2|  581|Homo sapiens membrane-type mosaic
           serine protease protein.
          Length = 581

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
 Frame = -2

Query: 434 ATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPV 267
           A+P+ +P PG   P R SP   + +RASPA A+LS   S +S+   + S   S      V
Sbjct: 59  ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLV 117

Query: 266 RGTFRAAPEVPSEFTVKLPA--CLRARVGTCLP 174
           R T   A  + S      PA    R   GT LP
Sbjct: 118 RATPVGAVPIRSSPARSAPATRATRESPGTSLP 150


>AK027798-1|BAB55376.1|  491|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14892 fis, clone PLACE1004270, weakly similar to
           TRANSMEMBRANE PROTEASE, SERINE 2 (EC 3.4.21.-). ).
          Length = 491

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
 Frame = -2

Query: 431 TPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPVR 264
           TP     PG   P + SP   + +RASPA A+LS   S +S+   + S   S      VR
Sbjct: 64  TPPGRASPGRASPAQASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVR 123

Query: 263 GTFRAAPEVPSEFTVKLPA--CLRARVGTCLP 174
            T   A  + S      PA    R   GT LP
Sbjct: 124 ATPVGAVPIRSSPARSAPATRATRESPGTSLP 155


>AB209711-1|BAD92948.1|  380|Homo sapiens RAB40B, member RAS
           oncogene family variant protein.
          Length = 380

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -2

Query: 746 PHWAPTKICKKGVSNFLKPALKSSELDGDRNRFSLPPA 633
           P   P K+ +K + NFL+ ALK +  +  R   +LPPA
Sbjct: 297 PQSPPQKLHQKQLQNFLRKALKETRRNLSRRSSALPPA 334


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,928,018
Number of Sequences: 237096
Number of extensions: 2233399
Number of successful extensions: 21272
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21252
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)