Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_A06
         (942 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    44   2e-06
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    44   2e-06
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    43   4e-06
AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced prot...    43   5e-06
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    41   2e-05
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           24   1.7  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    23   3.0  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    23   3.0  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 44.0 bits (99), Expect = 2e-06
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +2

Query: 359 CVVCGDKXSGKHYGQFNCEGC 421
           C +CGD+ SGKHYG ++CEGC
Sbjct: 110 CSICGDRASGKHYGVYSCEGC 130


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 44.0 bits (99), Expect = 2e-06
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +2

Query: 359 CVVCGDKXSGKHYGQFNCEGC 421
           C +CGD+ SGKHYG ++CEGC
Sbjct: 110 CSICGDRASGKHYGVYSCEGC 130


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 43.2 bits (97), Expect = 4e-06
 Identities = 19/33 (57%), Positives = 20/33 (60%)
 Frame = +2

Query: 323 RFSATDKGQNVECVVCGDKXSGKHYGQFNCEGC 421
           R  A   G  V C VCGDK SG HYG  +CEGC
Sbjct: 55  RVLAEFDGTTVLCRVCGDKASGFHYGVHSCEGC 87


>AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 30

 Score = 42.7 bits (96), Expect = 5e-06
 Identities = 17/26 (65%), Positives = 18/26 (69%)
 Frame = +2

Query: 344 GQNVECVVCGDKXSGKHYGQFNCEGC 421
           G  V C VCGDK SG HYG  +CEGC
Sbjct: 4   GTTVLCRVCGDKASGFHYGVHSCEGC 29


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 40.7 bits (91), Expect = 2e-05
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +2

Query: 335 TDKGQNVECVVCGDKXSGKHYGQFNCEGC 421
           T + Q   C+VCGD+ SG HY    CEGC
Sbjct: 179 TPRQQEELCLVCGDRASGYHYNALTCEGC 207


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 141 FIGAMNDAADAARCRSRGR 85
           F G +ND+A AA C S G+
Sbjct: 26  FKGQVNDSACAANCHSLGK 44


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 141 FIGAMNDAADAARCRSRGR 85
           F G +ND+A AA C S G+
Sbjct: 51  FKGQVNDSACAANCLSLGK 69


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 141 FIGAMNDAADAARCRSRGR 85
           F G +ND+A AA C S G+
Sbjct: 51  FKGQVNDSACAANCLSLGK 69


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,726
Number of Sequences: 438
Number of extensions: 1882
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30839445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)