Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_A05
(904 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0943 - 26191798-26192244,26192802-26192966,26193515-261936... 79 4e-15
01_01_0510 - 3723983-3724416,3724895-3725766,3725797-3726791,372... 33 0.31
05_01_0503 - 4196989-4197425,4197507-4199436,4200910-4201017 30 2.2
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171... 29 5.1
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 29 6.7
09_04_0152 - 15168285-15168733,15168813-15170712,15171653-15171757 28 8.8
06_03_0690 + 23545198-23545305,23545437-23547246,23547265-235473... 28 8.8
06_03_0689 + 23538367-23538474,23538583-23540557,23540647-23541092 28 8.8
06_03_0688 - 23525513-23525958,23527920-23529861,23529960-23530070 28 8.8
03_03_0218 + 15506438-15506533,15508340-15508405,15508515-155104... 28 8.8
01_05_0345 + 21181114-21181222,21181306-21181367,21181505-211815... 28 8.8
>06_03_0943 -
26191798-26192244,26192802-26192966,26193515-26193668,
26194153-26194346,26194494-26194695,26194899-26195103,
26195672-26195843
Length = 512
Score = 79.4 bits (187), Expect = 4e-15
Identities = 67/208 (32%), Positives = 100/208 (48%), Gaps = 20/208 (9%)
Frame = +2
Query: 338 LNTANAPVSLHCSD--ECRLSLVESIPEG--HMYPPNSTHLPTKNVWLDLIDEAQSKIEI 505
L A AP + ++ C+ LV+SIP H+ L T +V L A +++
Sbjct: 16 LLAAGAPAAPAAAEVATCKAWLVQSIPTDMPHLRRVPGV-LSTADVLQWLSGNATKSLDV 74
Query: 506 ASFYWTLRFNE------EYPYNSSI-------EGEQVFQALYAAGAKRNIKLKIAQNWPT 646
+ YW +Y Y+ S +G++V++AL A A R IK++I Q+ +
Sbjct: 75 LAQYWQFLAQPKNPKSGDYGYSESEMVRFGADKGQRVYKALEKA-ADRKIKIRIVQH--S 131
Query: 647 KSMPNIDTE---YLVKKKAAQVRSLNFSKLLGSGVLHTKFWIVDRTHFYIGSANMDWRSL 817
P+ D E + Q +L F GSGV+H K WI D+ YIGSAN DW+SL
Sbjct: 132 GFAPDFDKESADLAAGRPNVQNVTLLFGDWWGSGVVHAKVWISDKKDVYIGSANNDWKSL 191
Query: 818 TQVKELGLVAFNCSCLATDLGKIFDVYW 901
+QVKELG+ +C +A + F W
Sbjct: 192 SQVKELGIYFADCPQIAKTVEIYFQNLW 219
>01_01_0510 -
3723983-3724416,3724895-3725766,3725797-3726791,
3727332-3727439
Length = 802
Score = 33.1 bits (72), Expect = 0.31
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +2
Query: 611 NIKLKIAQNWPTKSMPNIDTEYLVKKKAAQVRSLNFSKLLGSGVLHTKFWIVDRTHFYIG 790
N ++K A + + P DT+Y +A + R +HTK IVD + IG
Sbjct: 618 NREVKQAGEYQPEEQPEADTDY---SRAQEARRFMI-------YVHTKMMIVDDEYIIIG 667
Query: 791 SANMDWRSLTQVKE 832
SAN++ RS+ ++
Sbjct: 668 SANINQRSMDGARD 681
>05_01_0503 - 4196989-4197425,4197507-4199436,4200910-4201017
Length = 824
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 743 LHTKFWIVDRTHFYIGSANMDWRSLTQVKE 832
+HTK IVD + +GSAN++ RS+ ++
Sbjct: 673 VHTKMMIVDDEYIIVGSANINQRSMDGARD 702
>11_01_0219 -
1710206-1710246,1710479-1710620,1710699-1710752,
1710838-1710909,1711631-1711699,1711807-1711848,
1711946-1712014,1712130-1712267,1712390-1712500,
1712576-1712726,1713720-1713775,1714076-1714753
Length = 540
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 581 QALYAAGAKRNIKLKIAQNWPTKSMPNIDTEYL 679
+A Y GAK+ K K +NW + + D EYL
Sbjct: 182 EAEYGGGAKQGKKKKKTENWMEEDSDSEDEEYL 214
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 743 LHTKFWIVDRTHFYIGSANMDWRSLTQVKE 832
+H+K IVD + IGSAN++ RS+ +++
Sbjct: 896 VHSKGMIVDDEYVIIGSANINQRSMEGIRD 925
>09_04_0152 - 15168285-15168733,15168813-15170712,15171653-15171757
Length = 817
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 743 LHTKFWIVDRTHFYIGSANMDWRSL 817
+H K IVD + +GSAN++ RSL
Sbjct: 662 VHAKLMIVDDEYVMVGSANLNERSL 686
>06_03_0690 +
23545198-23545305,23545437-23547246,23547265-23547348,
23547732-23548048,23549498-23549605,23550038-23550046
Length = 811
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 743 LHTKFWIVDRTHFYIGSANMDWRSL 817
+H+K IVD + +GSAN++ RS+
Sbjct: 661 VHSKMMIVDDEYIIVGSANINQRSM 685
>06_03_0689 + 23538367-23538474,23538583-23540557,23540647-23541092
Length = 842
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 743 LHTKFWIVDRTHFYIGSANMDWRSL 817
+H+K IVD + +GSAN++ RS+
Sbjct: 688 VHSKMMIVDDEYIIVGSANINQRSM 712
>06_03_0688 - 23525513-23525958,23527920-23529861,23529960-23530070
Length = 832
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 743 LHTKFWIVDRTHFYIGSANMDWRSL 817
+H+K IVD + +GSAN++ RS+
Sbjct: 678 VHSKMMIVDDEYIIVGSANINQRSM 702
>03_03_0218 +
15506438-15506533,15508340-15508405,15508515-15510417,
15510857-15511347
Length = 851
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 743 LHTKFWIVDRTHFYIGSANMDWRSLT--QVKELGLVAFNCSCLAT 871
+H K IVD + +GSAN++ RS+ + E+ + A+ S LA+
Sbjct: 682 VHAKTMIVDDEYIIVGSANINQRSMDGGRDTEIAMGAYQPSHLAS 726
>01_05_0345 +
21181114-21181222,21181306-21181367,21181505-21181588,
21182069-21182123,21182843-21182969,21183129-21183179,
21183275-21183374
Length = 195
Score = 28.3 bits (60), Expect = 8.8
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 252 WSAPYTPFSPLVIIAVSIFISH 187
W + PF PL+ A+S+++ H
Sbjct: 152 WDVAWLPFGPLIASALSLYVDH 173
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,331,167
Number of Sequences: 37544
Number of extensions: 466395
Number of successful extensions: 983
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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