Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP26_F_A03
(867 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0259 - 1996427-1998772 31 1.2
02_01_0020 - 127572-127637,127760-127819,127903-128004,128099-12... 30 2.8
12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649 29 3.6
10_08_0343 - 16960764-16960895,16961166-16961171,16961272-169616... 29 4.8
01_06_0661 - 30977760-30977783,30977944-30978014,30978045-30979464 29 6.4
12_02_0754 - 22817277-22817657,22817796-22817927,22818026-228182... 28 8.4
06_01_1082 - 8847795-8848033,8848511-8848724 28 8.4
05_03_0618 - 16262826-16263097,16263111-16263183 28 8.4
04_03_0641 + 18261332-18262423 28 8.4
03_02_0950 + 12661008-12662312,12662403-12662576 28 8.4
>03_01_0259 - 1996427-1998772
Length = 781
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 407 IFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSK 511
I ++ V++ N HHALKLI + + +I GDSK
Sbjct: 732 ILVKKNVRICN-HCHHALKLISRYSGRRIVVGDSK 765
>02_01_0020 -
127572-127637,127760-127819,127903-128004,128099-128194,
128649-128756,128849-128899,129018-130118
Length = 527
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +3
Query: 174 DDVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMXLRLPVYG 353
DD+L E+L + + + E +A+ ++ KKG V++E +K L+E T R P+Y
Sbjct: 310 DDLLIEKL--NSIEKKIEEKLAEL-DHTFGKKGRVLEEEIKDLVEERNSLTEHKRRPMYR 366
Query: 354 QRMERK 371
+ + K
Sbjct: 367 KGFDVK 372
>12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649
Length = 461
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 475 LVDQLEGVMVPFVYELDSLLGEDHSKLDG 389
+V GVM P + +L LLGE+++KL G
Sbjct: 7 IVGATTGVMKPLLSKLTKLLGEEYAKLKG 35
>10_08_0343 - 16960764-16960895,16961166-16961171,16961272-16961640,
16962118-16962304,16962567-16962759,16962864-16963137,
16963215-16963374,16963985-16964199,16964784-16964876,
16965192-16965260,16965293-16965445,16965534-16965737,
16966416-16966691,16967336-16967431,16967585-16967788,
16967877-16968069,16968229-16968374,16968771-16969425,
16971462-16971774,16971989-16972139,16972602-16973815,
16973933-16974182,16974784-16975035
Length = 1934
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = -3
Query: 565 LFSKHGGKLPGDFLAGFVFGVTECNFVVVLLVDQLEGVMVPFVYELDSLLGEDHSKLDGE 386
LFSK+ G+ P + GF F VTE + L D LE E D+ G K
Sbjct: 1304 LFSKYFGEAPIMHIPGFTFPVTE-----LFLEDILEKTRYKINSERDNFQGNSRRKRLAS 1358
Query: 385 VRFD 374
V+ D
Sbjct: 1359 VKSD 1362
>01_06_0661 - 30977760-30977783,30977944-30978014,30978045-30979464
Length = 504
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/99 (21%), Positives = 39/99 (39%)
Frame = +2
Query: 221 IRDRYRQML*ISEGKEGRGYQGSREASDRKRQEEHHGTSPTSLWTKDGKEIVKSYFPIQF 400
I+D+YR+M+ G G ++G R RQ W + G+ V
Sbjct: 166 IKDKYRRMVPRDRGSRGERFRGERFDKPEVRQWSRQENWGRKTWKEAGESTVPKMVGQGV 225
Query: 401 RVIFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSKDK 517
+ + +RD +AL + + + + ++ KDK
Sbjct: 226 YGVGPVLAALMAERRDFYALYIQEGMDFS-VSNKKKKDK 263
>12_02_0754 -
22817277-22817657,22817796-22817927,22818026-22818272,
22818473-22818909
Length = 398
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = +2
Query: 383 YFPIQFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKFTPVFGK 562
+F + RV+ + +KL+ +RD K I++QN +G + S++V++ F +G
Sbjct: 315 FFVLNARVL---ECIKLVARRDKCEAKWIEKQNQKLQLYG----RASRRVTFDFQADYGV 367
Query: 563 QQSLLQDHV 589
+ H+
Sbjct: 368 DSLVHMKHI 376
>06_01_1082 - 8847795-8848033,8848511-8848724
Length = 150
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 691 WYLEPSMYESDVMFFVYNREYNSV 762
W + Y DV+ F YN+EY+ V
Sbjct: 59 WLAGKTFYAGDVLVFKYNKEYHDV 82
>05_03_0618 - 16262826-16263097,16263111-16263183
Length = 114
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 173 SSWCKCGVRSQRTHGEDEGKQSQSHLGAV 87
S C+CG+RS+R +E + + LG V
Sbjct: 24 SGHCRCGLRSRRCTAREEFRSKEEMLGIV 52
>04_03_0641 + 18261332-18262423
Length = 363
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = -3
Query: 355 CP*TGRRSXMVFLLPFSIRRFTASLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTS 176
CP R M LP S+R+ SL+ P F + HLA +V+ + + SC
Sbjct: 267 CPNLNTRRIMT--LPSSLRKL--SLLGCPSIEFIDNSHLASSVTLKGLNLKLVSC-PDLI 321
Query: 175 SVLGA 161
S++GA
Sbjct: 322 SIVGA 326
>03_02_0950 + 12661008-12662312,12662403-12662576
Length = 492
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 177 DVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEV 278
+VL+ + +GEY+ AIA CS+ L++ K V
Sbjct: 411 EVLSSRASSYKEVGEYKKAIADCSKVLEKDKDNV 444
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,028,995
Number of Sequences: 37544
Number of extensions: 485621
Number of successful extensions: 1498
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1498
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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