Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP26_F_A02
         (1175 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens ...    34   1.1  

>AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens cDNA
            FLJ46115 fis, clone TESTI2037085. ).
          Length = 148

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 20/82 (24%), Positives = 35/82 (42%)
 Frame = +3

Query: 927  KNXEXQXRXXRKXKXXKXXEXKXKXXKEXXXXXXEEEKKAXXXEQKXXXXXXXXXRNKTQ 1106
            K  + + +  +K K  K  + K K  K+      +++KK    ++K         +NK +
Sbjct: 10   KKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKK 69

Query: 1107 XXXXKKXXKKKKXXKXTXXERK 1172
                KK  KKKK  K    ++K
Sbjct: 70   KKKKKKKKKKKKRKKKKKKKKK 91



 Score = 31.9 bits (69), Expect = 4.6
 Identities = 23/83 (27%), Positives = 29/83 (34%)
 Frame = +1

Query: 925  RKTKRXKXDXEGXRXXKXIXKXXXKXXKKXXNXXXKKKKKQXXXNKXXXXXXAXXXETKH 1104
            +K K+ K   +  R  K   K   K  KK      KKKKK+    K          + K 
Sbjct: 3    KKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62

Query: 1105 XXXXXKXTXKKKXXXKXXSXKEK 1173
                 K   KKK   K    K+K
Sbjct: 63   KKKNKKKKKKKKKKKKKKKRKKK 85



 Score = 31.5 bits (68), Expect = 6.1
 Identities = 23/88 (26%), Positives = 30/88 (34%)
 Frame = +1

Query: 910  KXXXXRKTKRXKXDXEGXRXXKXIXKXXXKXXKKXXNXXXKKKKKQXXXNKXXXXXXAXX 1089
            K    +K K+ K   +  +  K   K   K  KK      KKKKK+    K         
Sbjct: 4    KKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 63

Query: 1090 XETKHXXXXXKXTXKKKXXXKXXSXKEK 1173
             + K      K   KKK   K    K+K
Sbjct: 64   KKNKKKKKKKKKKKKKKKRKKKKKKKKK 91


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.312    0.126    0.325 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,276,770
Number of Sequences: 237096
Number of extensions: 64725
Number of successful extensions: 349
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16458822770
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)