Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP25_F_P24
         (926 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical pr...    33   0.38 
AF016683-8|AAM97998.1|  480|Caenorhabditis elegans Hypothetical ...    28   8.2  

>Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical
           protein T23D8.2 protein.
          Length = 232

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 106 PGCGPKIGELYQKWNKPIAGVALGVACVEVVGALFALCLANSI 234
           PGC   + +   K    + G+   +A +++VG  FA CL+ SI
Sbjct: 181 PGCIHSVEQWVLKNGAMVGGICAVLAAIQLVGVCFACCLSKSI 223


>AF016683-8|AAM97998.1|  480|Caenorhabditis elegans Hypothetical
           protein K09F6.10 protein.
          Length = 480

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -3

Query: 603 NCSLIXVDKIXNKCNIVYLKIYCENTH 523
           NC    V KI  KCNIV+    C  +H
Sbjct: 359 NCEKNGVGKICEKCNIVFQSESCYESH 385


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,378,319
Number of Sequences: 27780
Number of extensions: 213423
Number of successful extensions: 422
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)